Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02167 ATGGCACGGTGCATATTGTCACATGTTTTGGCTTTTGCACTTGTTGCTGGGTTGTGTGTCTTCAGCTGCTTGGTTAACGTTGCACAAGCTCAATCTGCAAACGCCACCACTGATCCTTCCGAAGCAAGAGCTTTAAATTCAATCTTCAGCAAATGGGATATATTGGCAAACCCAACTCAATGGAATATTAGTAGTGAACTTTGTAGTGGAAGAGCTATCGACGCTACCACCACCATCGATGACACAACTTTCAACCCATTCATCAAATGTGATTGCTCCTATGACAGTAGAACTACTTGCCGCATCACAGCATTAAAGGTTTATGCAATGAGCATAGTTGGTACAATTCCAGAAGAGTTATGGACTTTGACTTACCTCACCAATTTAAATCTTGGCCAAAATTACTTGACGGGTTCTCTACCTCCAAACATTGGAAATCTAACTCGTATGCAATACTTGAGCATTGGCATCAATAATTTTTCTGGGGAACTTCCAAAGGAATTGGGAAATCTTACAGAGTTAAGATCATTGGCTTTTGGGTCAAACAAGTTCAGAGGATCTCTTCCATCAGAACTTGGGAAACTGACAAATTTAGAACAAATTTACTTTGATAGTTCAGGAATTAGCGGTCCAATTCCTTCCACATTTGCAAACCTTAAGAATTTGTTGCACGTAGGAGCTTCAGACACGGAACTCACAGGAAAAATACCAGACTTCATAGGGAATTGGTCTAAGCTTCAAACCTTGAGATTTCAGGGCAATTCTTTTAATGGCTCAATACCATCATCATTTTCAAATTTGAGTTCTTTAACAGAATTGAGAATCAGTGGTTTATCTAATGGGAGTTCCTCATTGGAATTTTTAAGGAATATGAAATCTTTGACTATCTTAGAACTGAGGAATAACAATATTTCTGGTTCGATTTCATCCACCATTGGAGAGTTACACAATTTGAATCAGTTGGATTTAAGCTTCAATAACATCACAGGACAAAATTTGGGATCAATTTTCAATTTGAGTTCGCTCACTTACTTGTTTCTTGGAAATAATAAATTCAACGGCACCCTTCCGATGCAGAAAAGTTCATCTCTTGTAAATATAGACTTGTCATACAATGATCTATCGGGTAGTCTCCCCTCTTGGGTAAACGAACCAAATTTACAACTGAATTTAGTTGCCAACAACTTAGATGTCTCAAATGCCAGTGGCTTGCCTATTGGGCTCAATTGTCTCCAAAAAAATTTTCCTTGCAATCAAGGAATTGGAAGATACTCTGACTTTGCAATCAAGTGTGGCGGTAACCAAATTAGGTCGGCAGATGGAATAGTGTATGAAATGGACAATCAAACACTTGGTCCTGCTACATACTTTGTTACTGATGCAAACAGATGGGCTATTAGTAATGTTGGATTATTTACGGGGAGCAGTAATCCTGTATACAAAAGTTTTGTGTCTAATCAGTTCACTGGCACTGTGAATTCGGAGCTCTTCCAAACAGCACGACTTTCTGCTTCGTCATTAAGATATTATGGCCTGGGGCTGGAAAATGGTTTTTACAACATCACCCTTCAATTTGCAGAAACAGCTATTCTAGATTCTACTAGAAGTTGGGAAAGCCTTGGGAGGCGAGTCTTTGATATTTATATTCAGGGTACTCGTGTTTTGAAGGATTTTGATATACAGAAGGAAGCTGGGGGCATCTCATATAAAGCTATCCAAAGGCAATTTAGATTTGAAGTGACAGAAAACTATCTTGAGATTCATCTCTTTTGGGCTGGAAAAGGTACTTGTTGCATACCAACTCAAGGTACTTATGGGCCCTTAATTCAAGCAATCCATGCTATCCCAGATTTCATACCTACTGTTAGTAACAAACCTCCAAGTAGTAACAACAATAATATCGGTCTAATTCTTGGAATCGTACTTGGAGTTGGAGTTGTAAGCGTTTTATCAATTTTTGCAATTTTCTGTATCATTCGGAGAAGAAGACGTCGTGATGATGAAAAAGAGCTTCTAGGAATTGATACTAAGCCCTACACTTTCAGCTATTCTGAGTTAAAGAATGCTACAAATGATTTTAATCTTGAAAATAAGCTTGGAGAGGGAGGTTTTGGACCTGTTTATAAGGGGACACTTAATGATGGAAGAGTCATTGCTGTGAAACAACTATCTGTGGGATCCCATCAAGGAAAGAGCCAATTCATAACTGAGATTGCTACTATATCAGCTGTGCAACATCGTAATCTGGTCAAATTATATGGATGTTGCATTGAGGGGAGTAAAAGACTGCTTGTCTATGAATATCTAGAAAATAAGAGTCTTGATCAAGCATTGTTTGGAAAATGTTTAACCCTCAATTGGTCCACACGCTATGATATATGCTTGGGTGTTGCTAGAGGTTTAACTTATTTACATGAAGAGTCACGTCTTCGCATTGTACACCGTGATGTGAAAGCCAGTAATATTTTGCTTGATTACGAGCTTATTCCGAAAATATCTGACTTTGGTTTGGCCAAATTATATGATGATAAAAAGACCCATATAAGTACCGGTGTGGCGGGGACAATTGGATATCTTGCACCGGAGTATGCCATGCGTGGCCACCTTACAGAGAAAGCAGATGTATTTTCCTTTGGTGTCGTGGCTTTAGAGTTAGTTAGTGGAAGGCCAAATTCTGATTCAAGTTTGGAAGGAGAGAAGGTGTATCTTCTAGAATGGGCTTGGCAACTTCATGAAAAAAATTGCATAATTGATCTGGTGGATGATAGACTTTCAGAATTCAACGAGGAAGAAGTAAAACGTGTTGTAGGAATAGCACTTTTGTGCACTCAGACATCACCAACATTACGACCATCAATGTCACGTGTGGTGGCAATGCTTTCAGGAGATATTGAAGTAAGCACTGTAACTTCAAAGCCCGGATACCTATCTGACTGGAAATTTGAGGATGTGAGCAGCTTCATGACTGGCATTGAAATCAAAGGATCAGATACAAATTACCAGAATTCATCAGGAAGTACCAGCATGATGGGTGGTGTAGACTATTATTCACCAAGAGATGTTTCTAAACCGATCCTTAAGGAGACTCTTTGGGAGGGTAGGTGA 3105 0.3907 MARCILSHVLAFALVAGLCVFSCLVNVAQAQSANATTDPSEARALNSIFSKWDILANPTQWNISSELCSGRAIDATTTIDDTTFNPFIKCDCSYDSRTTCRITALKVYAMSIVGTIPEELWTLTYLTNLNLGQNYLTGSLPPNIGNLTRMQYLSIGINNFSGELPKELGNLTELRSLAFGSNKFRGSLPSELGKLTNLEQIYFDSSGISGPIPSTFANLKNLLHVGASDTELTGKIPDFIGNWSKLQTLRFQGNSFNGSIPSSFSNLSSLTELRISGLSNGSSSLEFLRNMKSLTILELRNNNISGSISSTIGELHNLNQLDLSFNNITGQNLGSIFNLSSLTYLFLGNNKFNGTLPMQKSSSLVNIDLSYNDLSGSLPSWVNEPNLQLNLVANNLDVSNASGLPIGLNCLQKNFPCNQGIGRYSDFAIKCGGNQIRSADGIVYEMDNQTLGPATYFVTDANRWAISNVGLFTGSSNPVYKSFVSNQFTGTVNSELFQTARLSASSLRYYGLGLENGFYNITLQFAETAILDSTRSWESLGRRVFDIYIQGTRVLKDFDIQKEAGGISYKAIQRQFRFEVTENYLEIHLFWAGKGTCCIPTQGTYGPLIQAIHAIPDFIPTVSNKPPSSNNNNIGLILGIVLGVGVVSVLSIFAIFCIIRRRRRRDDEKELLGIDTKPYTFSYSELKNATNDFNLENKLGEGGFGPVYKGTLNDGRVIAVKQLSVGSHQGKSQFITEIATISAVQHRNLVKLYGCCIEGSKRLLVYEYLENKSLDQALFGKCLTLNWSTRYDICLGVARGLTYLHEESRLRIVHRDVKASNILLDYELIPKISDFGLAKLYDDKKTHISTGVAGTIGYLAPEYAMRGHLTEKADVFSFGVVALELVSGRPNSDSSLEGEKVYLLEWAWQLHEKNCIIDLVDDRLSEFNEEEVKRVVGIALLCTQTSPTLRPSMSRVVAMLSGDIEVSTVTSKPGYLSDWKFEDVSSFMTGIEIKGSDTNYQNSSGSTSMMGGVDYYSPRDVSKPILKETLWEGR 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02167 1034 Gene3D Ribonuclease Inhibitor 38 281 IPR032675 -
Gma08g02167 1034 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 140 1019 - -
Gma08g02167 1034 SUPERFAMILY L domain-like 97 405 - -
Gma08g02167 1034 SMART serkin_6 693 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02167 1034 SUPERFAMILY Protein kinase-like (PK-like) 676 979 IPR011009 -
Gma08g02167 1034 Gene3D Ribonuclease Inhibitor 282 404 IPR032675 -
Gma08g02167 1034 ProSiteProfiles Protein kinase domain profile. 693 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02167 1034 Gene3D Phosphorylase Kinase; domain 1 655 768 - -
Gma08g02167 1034 ProSitePatterns Serine/Threonine protein kinases active-site signature. 812 824 IPR008271 GO:0004672|GO:0006468
Gma08g02167 1034 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 140 1019 - -
Gma08g02167 1034 Gene3D Transferase(Phosphotransferase) domain 1 769 972 - -
Gma08g02167 1034 Pfam Leucine rich repeat 293 352 IPR001611 GO:0005515
Gma08g02167 1034 Pfam Malectin domain 426 612 IPR021720 -
Gma08g02167 1034 Pfam Protein tyrosine and serine/threonine kinase 694 960 IPR001245 GO:0004672|GO:0006468
Gma08g02167 1034 Gene3D - 426 616 - -
Gma08g02167 1034 CDD STKc_IRAK 699 960 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02167 Gma-Chr8 20288426 20310272 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02167 101 251 Receptor kinase-like Gene Family AT1G56120 25.166 2.29e-08 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma08g02167 PK_Tyr_Ser-Thr 2.5e-47 CL0016