Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02166 AGAGCTTTAAATTCAATCTTTAAGAAATGGGATATATTGGCAAACCCAACTCATTGGAATATTAGCGGTGAACTTTGTACTGGAAGAGCCATCGACACTTCCCTCATTGATGATACAACCTTCAACCCATTGATCAAATGTGATTGTTCCTATGACAATAGAACTACTTGTCGCATCACAGCATTAAAAGTTTATGCAATGAGCGTAGTTGGTACAATTCCAGAAGAGTTATGGACTTTGACTTACCTCACCAATTTAAATCTTGGCCAAAATTACTTGACAGGTTCTCTACCTCCAAGCATTGAAAATCTAACTCGTTTGCAATACTTGAGCCTTGGCATCAATAATATTTCTGGAGAGCTTCCAAAGGAATTGGGAAATCTTACAGAGTTAAAATTATTGGCTTTTGGATCAAACAAGTTTAGAGGATCTCTTCCATCTGAACTTGGAAAATTGACAAATTTAGAAGAAATTCACTTTGATAGTTCAGGAATTAGCGGTCTAATTCCTTCCACATTTGCAAACCTTAGGAATTTGAAACAAGTATGGGCTTCAGACACGGAACTCACAGGAAAAATACCGGACTTCATAGGGAATTGGTCTAAGCTTCAATCCTTGAGATTTCAGGGCAATTCTTTTAATGGCTCAATACCATCATCATTTTCTAATTTGAGTTCTTTAACAGAATTGAGAATCACAGGTTTATCTAATGGGAGTTCCTCATTGGAATTTTTAAGGAATATGAAATCTTTGACTATCTTAGAACTAAAGAATAACAATATTTCTGGTTTGATTCCATCCACCATTGGAGAGTTACACAATTTGAATCAATTGGATTTAAGCTTCAATAACATCACAGGACAAAATTTGGGATCAATTTTCAATTTGAGCTCACTCTCTTTCTTGTTTCTTGGAAATAATAAATTCAACGGTACCCTTCCGATGCAGAAAAGTCCATCTCTTGTAAATATAGACTTGTCATACAATGATCTATCGGGTAGCCTCCCCCCTTGGGTAAACGAACCAAATTTACAATTGAATTTAGTTGCCAACAACTTAGATGTCTCAAATGCCGGTGGCTTGCCTATTGGGCTCAATTGTCTCCAAAAAAAATTTCCTTGCAATCAAGGAGTTGGAAGATACTCTGACTTTGCAATCAAGGGTGGTGGTAACCAAATTAGGTCGGCAGATGGAATAGTGTATGAAATGGACAATCAAACACTTGGTCCTGCTACATACTTTGTTACTGATGCAAACAGATGGGCTGTTAGTAATGTTGGATTATTTGCGGGGAGCAGTAATCCTGTATACAAAAGTTTTGTGCCTAATCAGTTCGCTGGCACTGTGAATCCGGAGCTCTTCCAAACAGCACGACTTTCTGCTTCGTCATTAAGATATTATGGCCTGGGGCTGGAAAATGGTTTTTACAACATAACCCTTCAATTTGCAGAAACAGCTATTCTAGATTCTAATAGAACCTGGGAAAGCCTTGGGAGGCGAGTCTTTGATATTTATATTCAGGGTACTCGTGTTTTGAAGGATTTTGATATACAGAAGGAAGCTGGGGGCATCTCATATAGAGCTATCCAAAGGCAATTTAGATTTGAAGTGACAGAAAACTATCTTGAGATTCATCTCTTTTGGGCTGGAAAAGGTACTTGTTGCATACCAACTCAAGGTACTTATGGGCCCTTAATTCAAGCAATCCATGCTATTCCAGATTTCATACCTACTGTTAGTAACAAACCTCCAAGTAGTAGCAACAATAATATCGGTCTAATTCTTGGAATCGTATTTGGAGTTGGAGTTGTAAGCGTTTTATCAATTTTTGCAATTTTCTATATCATTCGGAGAAGAAGACGTCGTGATGATGAAAAAGAGCTTCTAGGAATTGATACTAAGCCCTACACTTTCAGCTATTCTGAGTTAAAGAATGCTACAAATGACTTTAATCATGAAAATAAGCTTGGAGAGGGAGGTTTTGGACCTGTTTATAAGGGGACACTTAACGATGGAAGGGCTATTGCTGTGAAACAACTATCTGTGGGATCCCATCAAGGAAAGAGCCAATTCATAACTGAGATTGCTACTATATCAGCTGTGCAACATCGTAATCTGGTCAAATTATATGGATGTTGCATTGAGGGGAGTAAAAGACTGCTTGTCTATGAGTATCTAGAAAATAAGAGTCTTGATCAAGCATTGTTTGGAAAATGTTTAACCCTCAATTGGTCCACACGCTATGATATATGCTTGGGTGTTGCTAGAGGTTTAACTTATTTACATGAAGAGTCACGTCTTCGCATTGTACACCGTGATGTGAAAGCTAGTAATATTTTGCTTGATTATGAGCTTATTCCAAAAATATCTGACTTTGGTTTGGCCAAATTATATGATGATAAAAAAACCCATATAAGTACCGGTGTGGCGGGGACAATTGGATATCTTGCACCGGAGTATGCCATGCGTGGCCTCCTTACAGAGAAAGCAGATGTATTTTCCTTTGGTGTTGTGGCTCTAGAGTTAGTTAGTGGGAGGCCAAATTCTGATTCAAGTTTGGAAGGAGAGAAGGTGTATCTTCTAGAATGGGCTTGGCAACTTCATGAAAAAAATTGCATAATTGATCTGGTGGATGATAGACTTTCAGAATTCAACGAGGAAGAAGTAAAACGTATTGTAGGAATAGGACTTTTGTGCACTCAGACATCACCAACATTGCGACCATCAATGTCACGTGTGGTGGCAATGCTTTCAGGAGATATTGAAGTAGGCACTGTACCTTCAAAGCCTGGATACCTATCTGACTGGAAATTTGAGGATGTGAGCAGCTTCATGACTGGCATTGAAATCAAAGGATCAGATACAAGTTACCAGAATTCATCAGGAAGTACAAGCATGATGGGTGGTGTAGACTATTATCCACCAAGAGATGTTTCTAAACCGATCCTTAAGGAGGCTCTTAGGGAGGGTAGATGA 2976 0.3851 RALNSIFKKWDILANPTHWNISGELCTGRAIDTSLIDDTTFNPLIKCDCSYDNRTTCRITALKVYAMSVVGTIPEELWTLTYLTNLNLGQNYLTGSLPPSIENLTRLQYLSLGINNISGELPKELGNLTELKLLAFGSNKFRGSLPSELGKLTNLEEIHFDSSGISGLIPSTFANLRNLKQVWASDTELTGKIPDFIGNWSKLQSLRFQGNSFNGSIPSSFSNLSSLTELRITGLSNGSSSLEFLRNMKSLTILELKNNNISGLIPSTIGELHNLNQLDLSFNNITGQNLGSIFNLSSLSFLFLGNNKFNGTLPMQKSPSLVNIDLSYNDLSGSLPPWVNEPNLQLNLVANNLDVSNAGGLPIGLNCLQKKFPCNQGVGRYSDFAIKGGGNQIRSADGIVYEMDNQTLGPATYFVTDANRWAVSNVGLFAGSSNPVYKSFVPNQFAGTVNPELFQTARLSASSLRYYGLGLENGFYNITLQFAETAILDSNRTWESLGRRVFDIYIQGTRVLKDFDIQKEAGGISYRAIQRQFRFEVTENYLEIHLFWAGKGTCCIPTQGTYGPLIQAIHAIPDFIPTVSNKPPSSSNNNIGLILGIVFGVGVVSVLSIFAIFYIIRRRRRRDDEKELLGIDTKPYTFSYSELKNATNDFNHENKLGEGGFGPVYKGTLNDGRAIAVKQLSVGSHQGKSQFITEIATISAVQHRNLVKLYGCCIEGSKRLLVYEYLENKSLDQALFGKCLTLNWSTRYDICLGVARGLTYLHEESRLRIVHRDVKASNILLDYELIPKISDFGLAKLYDDKKTHISTGVAGTIGYLAPEYAMRGLLTEKADVFSFGVVALELVSGRPNSDSSLEGEKVYLLEWAWQLHEKNCIIDLVDDRLSEFNEEEVKRIVGIGLLCTQTSPTLRPSMSRVVAMLSGDIEVGTVPSKPGYLSDWKFEDVSSFMTGIEIKGSDTSYQNSSGSTSMMGGVDYYPPRDVSKPILKEALREGR 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02166 991 SMART serkin_6 650 917 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02166 991 Pfam Leucine rich repeat 250 309 IPR001611 GO:0005515
Gma08g02166 991 Gene3D Transferase(Phosphotransferase) domain 1 726 924 - -
Gma08g02166 991 ProSiteProfiles Protein kinase domain profile. 650 923 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02166 991 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 97 976 - -
Gma08g02166 991 Pfam Protein tyrosine and serine/threonine kinase 652 917 IPR001245 GO:0004672|GO:0006468
Gma08g02166 991 Pfam Malectin domain 383 569 IPR021720 -
Gma08g02166 991 CDD STKc_IRAK 656 917 - -
Gma08g02166 991 Gene3D Phosphorylase Kinase; domain 1 613 725 - -
Gma08g02166 991 SUPERFAMILY Protein kinase-like (PK-like) 633 938 IPR011009 -
Gma08g02166 991 SUPERFAMILY L domain-like 53 357 - -
Gma08g02166 991 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 97 976 - -
Gma08g02166 991 ProSitePatterns Serine/Threonine protein kinases active-site signature. 769 781 IPR008271 GO:0004672|GO:0006468
Gma08g02166 991 Gene3D Ribonuclease Inhibitor 2 237 IPR032675 -
Gma08g02166 991 Gene3D Ribonuclease Inhibitor 238 373 IPR032675 -
Gma08g02166 991 Gene3D - 384 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02166 Gma-Chr8 20241076 20259137 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02166 107 991 Receptor kinase-like Gene Family AT1G56120 61.755 0.0 1099
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma08g02166 PK_Tyr_Ser-Thr 1.1e-46 CL0016