Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02161 ATGAGTCAAGGAAATAGGAATTATTTTTCATGTCCCATCTGCAGGAATCAACGAAGGCGTCACGATGATAATTGTGAGTTTGGGCAATACTTTCTTGGTAGATCAACAGACTTTGAGAGTGCTTGTAGGCTCTTTGGATTCGCAAACTTGGTTAGACTGATGCGTTCTGTGGAACCATCTGAAAGGCAAGCTACTGCCGATTCCATTTTAATGGAGGCAAACATTTGGGATCGTGACCCTATTAACGGTGCCTATGGTCATGTGTTTAATTTGGTTTCCCAAATCCAGTCATTTGAAAGCGAATTAGAAACTATAAATAATTGGCTGGCGCATATTCGAGATCAACAAAGGCAACCAAGTTCATTTTCCCCTAACATCCCAAACCAAAGTATCCAAGATGAAGGTTCCAACACCCCGATTCCAAGCTTGATTGGAGCAGATATCTCTACAAGGTCTTCTGAAAAAGGAGAATCAAGTATTGTTGCGCCTAAGGAGGATGCGAATATTGTTGTTAGAGAGAGAGATTCAAAAGTTGATGACAATGAGGAAGGCACTATTCCTGATAAAGAACAAGTAGATTATTTCCGTGACGACTAA 597 0.407 MSQGNRNYFSCPICRNQRRRHDDNCEFGQYFLGRSTDFESACRLFGFANLVRLMRSVEPSERQATADSILMEANIWDRDPINGAYGHVFNLVSQIQSFESELETINNWLAHIRDQQRQPSSFSPNIPNQSIQDEGSNTPIPSLIGADISTRSSEKGESSIVAPKEDANIVVRERDSKVDDNEEGTIPDKEQVDYFRDD 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02161 198 PANTHER LOB DOMAIN-CONTAINING PROTEIN 25-LIKE 9 177 - -
Gma08g02161 198 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 177 - -
Gma08g02161 198 MobiDBLite consensus disorder prediction 116 157 - -
Gma08g02161 198 MobiDBLite consensus disorder prediction 116 198 - -
Gma08g02161 198 ProSiteProfiles LOB domain profile. 9 109 IPR004883 -
Gma08g02161 198 MobiDBLite consensus disorder prediction 167 198 - -
Gma08g02161 198 Pfam Lateral organ boundaries (LOB) domain 10 105 IPR004883 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02161 11 110 AS2 family AT3G50510 33.663 9.22e-19 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma08g02161 LOB 3.3e-21 No_clan