Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02143 ATGGCTAAGGTTGAAAGTGTTCATGACTTCCTCAAAGGAAAGACCATTTTGGTTACCGGTGCAACGGGATTTGTAGGAAAAGTTTCTGTGGAGAAGATATTAAGAGTTCAACCTGACATAAAAAAGTTATACCTTCTATTGAGAGCATCAAATCCTTATTTAGCTACTCACCGCTTGCAAAATGAGGTCATTGGGAAGGACATATTTCGGGTGCTACGTGATAAGTGGGGTGCAGATTTTGGTTCTTTTATATCAAAGAAAGTGGTAGCAGTTGCTGGTGATGTTTCTCTTAACAACTTGGGAATTAAAGACGAAAACATGAGGAGCCAGATGTTTGAAGAGTTAAATGTTATAGTACACACCGCTGCAACTACCAATTTTAACGAGAGATATGATATTGCGATAGGTACTAACACGATGGGAGCTTTTCATGTTGTGAACTTCGCTAAAAGTTGTCATAAATTAGAGATTGTTCTCCATGTATCTACTGCCTACGTGTGTGGGGAGGCCGAAGGACTTATAGTTGAGGAACCCTTACATGTCAATGGAATGCAAAAAGGATCTACAAAATTAGATATCGAGTTAGAAAAACAGTTGATTGAAGAAAAACTGAAAGAGTTCAAAGCACATAACACTGATAAAGAAGTAATCACATCGGTTATGAAAAGTTTTGGACTTGCAAGGGCAAATTTACATGGCTGGCCAAACACCTATGTGTTCACCAAAGCAATGGGAGAAATACTTTTAATGAAAATGAAAGACACTCTCCCATTGTTCGTTATACGCCCCACTACGGTCGTCAGCACACACTCTGAACCTTTTCCAGGTTGGATTGAAGGTGTCAGAACTATAGACTTTGTGGTGGTTAATTATGGTCAGGGAATACTAACAAGCTTTGTTGGAAATTCAGAAACAATTTTAGATTTGATTCCAGTAGACATGGTGGTAAATTTCATGATAGTGGCATTGATGGCTTTGTCCAAAGGCTTTTACTTCTTGCACCTTTTTGTTCCTGCACCCTCCAAAAAGACGCACATTCCCACCAAGATGATGAAACCCATCATCACTAGTTCCCACCCCGTTTTAACCCTTCACTTTTGGGTGTCCTTCATCACAATGATCTCTACCACCTCCACCTCCACTCAACCCCTCCCCTCCGATGTTGTCATCTGCGCCATCAACAAGAAGGGTATTATTGCCCTTTGGGGTACAAGAAGCAAGAAAGGGTGCAAAAAGCAATTGTCCATATTACAATGTGAGTTCAAACCACCAATGCATTTAGGCCAACTCATAAAACAACTCAAGCAATCCAGAAAAGGGGTGAaaaagagatatgaagggaaatag 1347 0.3972 MAKVESVHDFLKGKTILVTGATGFVGKVSVEKILRVQPDIKKLYLLLRASNPYLATHRLQNEVIGKDIFRVLRDKWGADFGSFISKKVVAVAGDVSLNNLGIKDENMRSQMFEELNVIVHTAATTNFNERYDIAIGTNTMGAFHVVNFAKSCHKLEIVLHVSTAYVCGEAEGLIVEEPLHVNGMQKGSTKLDIELEKQLIEEKLKEFKAHNTDKEVITSVMKSFGLARANLHGWPNTYVFTKAMGEILLMKMKDTLPLFVIRPTTVVSTHSEPFPGWIEGVRTIDFVVVNYGQGILTSFVGNSETILDLIPVDMVVNFMIVALMALSKGFYFLHLFVPAPSKKTHIPTKMMKPIITSSHPVLTLHFWVSFITMISTTSTSTQPLPSDVVICAINKKGIIALWGTRSKKGCKKQLSILQCEFKPPMHLGQLIKQLKQSRKGVKKRYEGK 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02143 448 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 324 IPR036291 -
Gma08g02143 448 CDD FAR-N_SDR_e 14 323 - -
Gma08g02143 448 Gene3D - 3 383 - -
Gma08g02143 448 PANTHER FATTY ACYL-COA REDUCTASE 7 330 - -
Gma08g02143 448 Coils Coil 431 448 - -
Gma08g02143 448 PANTHER MALE STERILITY PROTEIN 2-RELATED 7 330 IPR026055 GO:0080019
Gma08g02143 448 Pfam Male sterility protein 18 319 IPR013120 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02143 Gma-Chr8 19686939 19697269 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02143 10 327 Acyl Lipid Metabolism Gene Families AT5G22500 52.978 9.67e-122 358