Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02138 ATGAAGTACGTGTTGGTGACAGGTGGAGTTGTGAGTGGACTTGGGAAAGGAGTCACTGCAAGCAGTATTGGAGTGCTCCTTCAGGCTTGCGGCTTTCGGGTTACTTCTATCAAGATTGATCCCTATCTGAACACTGATGCAGGGACAATGTCCCCTTTTGAGCATGGGGAAGTGTTTGTTTTAGATGATGGCGGTGAGGTTGACCTTGATCTTGGAAACTATGAACGTTTCTTGGACCTCAAATTAACTCGTGACAATAATATCACAACTGGGAAAATATATCAGTCTGTTATTGAAAAGGAGAGAAGAGGAGATTATCTTGGCAAGACTGTGCAGGTTGTTCCACACATTACTGATGCCATCCAAGAATGGATAGAGTGTGTGGCACAGATACCAGTTGATGGAAAAGAAGGCCCAGCTGATGTTTGTGTTATTGAGTTGGGTGGAACTATTGGAGATATTGAGTCTATGCCTTTTATTGAAGCACTTGGCCAATTTTCATACCGTGTAGGCCCTGGCAACTTCTGTTTAGTTCATGTCAGCCTGGTGCCTGTTCTCAATGTTGTTGGTGAACAGAAAACAAAGCCAACTCAACACAGTGTCCGCCAACTTAGAGGGTTAGGGTTGACCCCAAATCTTCTTGCTTGTCGCAGTTCAAAGGAACTTGATGACAATGTTAAGGAAAAACTTTCTCAATTTTGTCATGTTCCGTCATCAAGCATACTAACTCTCTATGATGTTCCAAATATTTGGCACATTCCTTTGCTATTAAGAGACCAAAAGGCGCATGAGGCAATCCTGAAAACATTAAACCTGCGAGGTGTTGCTACAGAGCCTAATTTTAAGGAGTGGATTGCGACAACAAAAGTATATGACAAATTTCATGAAATGGTTAGAATTGCAATGGTGGGAAAATATACTAACCTCTCAGATGCATATCTTTCTGTACTGAAGGCACTTTTGCATGCTTCTACTGCTTGCAATCATAAGCTTGTTGTGGATTTGGTTCCCGCTGAACATCTCGAAGATGATACCTCTAAAGAGGATCCTGATGCATATAAAGCTGCTTGGGGTCTTTTGAAGGGTGCTAATGGGATTCTAGTTCCAGGAGGTTTTGGTGACAGAGGAGTGGAAGGAAAAATTCTTGCTGCCAAGTATGCTCGAGAAAATAACATTCCATATCTGGGCATTTGCTTGGGGATGCAAATTGCTGTCATTGAGTTTTCAAGATCTGTTCTGGGTCTTCATGATGCTAATAGCACAGAATTTGATCCCAAAACCGAAAACCCTTGTGTCATATTTATGCCAGAAGGTTCAAAGACTCATATGGGGGGAACTATGCGTCTTGGTTCAAGGAGAACTTACTTTCATGTTGCTGACTGCAAATCGGCCAAGTTGTATGGTAATGCAAGCTTTGTTGATGAGCGACATCGGCATAGATACGAGGTTAATCCTGATATGATATCACAACTTGAGAGTGCTGGTCTATCTTTTGTTGGCAAAGATGAAACTGGGAAGCGCATGGAGATAGTTGAATGTCCCAGTCATCCTTTCTTCATTGGTGCTCAGTTTCATCCTGAGTTCAAGTCCAGACCAGGGAAACCTTCTCCATTATTCTTAGGATTAATATCAGCAGCATGTGAGAGGACAATTGTGCCTGCAAGCAATGGCTATAGCAAGTTAACAAATGGGATACACTCACCATTGTTGAAAGCAGCAGCAGCACATAATGGAAATAATGGGTTCAAATCTTCCAATAGTTCCTTAAATGGTGTATATACAAGTACAACTACCAATGGGGTGTGTTGA 1809 0.4207 MKYVLVTGGVVSGLGKGVTASSIGVLLQACGFRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDLKLTRDNNITTGKIYQSVIEKERRGDYLGKTVQVVPHITDAIQEWIECVAQIPVDGKEGPADVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLVHVSLVPVLNVVGEQKTKPTQHSVRQLRGLGLTPNLLACRSSKELDDNVKEKLSQFCHVPSSSILTLYDVPNIWHIPLLLRDQKAHEAILKTLNLRGVATEPNFKEWIATTKVYDKFHEMVRIAMVGKYTNLSDAYLSVLKALLHASTACNHKLVVDLVPAEHLEDDTSKEDPDAYKAAWGLLKGANGILVPGGFGDRGVEGKILAAKYARENNIPYLGICLGMQIAVIEFSRSVLGLHDANSTEFDPKTENPCVIFMPEGSKTHMGGTMRLGSRRTYFHVADCKSAKLYGNASFVDERHRHRYEVNPDMISQLESAGLSFVGKDETGKRMEIVECPSHPFFIGAQFHPEFKSRPGKPSPLFLGLISAACERTIVPASNGYSKLTNGIHSPLLKAAAAHNGNNGFKSSNSSLNGVYTSTTTNGVC 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02138 602 Gene3D - 1 292 IPR027417 -
Gma08g02138 602 CDD CTPS_N 2 268 IPR017456 GO:0003883|GO:0006221
Gma08g02138 602 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 272 IPR027417 -
Gma08g02138 602 PANTHER CTP SYNTHASE 1 573 IPR004468 GO:0003883|GO:0006221
Gma08g02138 602 TIGRFAM PyrG: CTP synthase 1 545 IPR004468 GO:0003883|GO:0006221
Gma08g02138 602 Pfam CTP synthase N-terminus 2 272 IPR017456 GO:0003883|GO:0006221
Gma08g02138 602 Pfam Glutamine amidotransferase class-I 309 544 IPR017926 -
Gma08g02138 602 Hamap CTP synthase [pyrG]. 1 550 IPR004468 GO:0003883|GO:0006221
Gma08g02138 602 Gene3D - 295 555 IPR029062 -
Gma08g02138 602 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 299 552 - -
Gma08g02138 602 SUPERFAMILY Class I glutamine amidotransferase-like 298 549 IPR029062 -
Gma08g02138 602 CDD GATase1_CTP_Synthase 298 543 IPR033828 GO:0003883|GO:0006241
Gma08g02138 602 PANTHER CTP SYNTHASE 1 573 - -
Gma08g02138 602 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02138 Gma-Chr8 19556385 19562871 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02138 08 19556385 19562871 Gma08g02138 08 19556385 19562871 ECH
Gma08g02138 08 19556385 19562871 Gma15g02081 15 38287665 38294737 GST
Gma15g02580 15 53894295 53897935 Gma08g02138 08 19556385 19562871 PCT
Gma08g02138 08 19556385 19562871 Gma15g02540 15 53348064 53353903 PCT
Gma08g02138 08 19556385 19562871 Gma08g01474 08 12728081 12734956 PCT