Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02135 ATGAACATTAATCAATTATCATTATTCAGCAAAAAAATCTCCACTTTTTTGTTTTTGTTCAATCTCGAATACCACAAACTCAAAATCCCAAACCCGTGTGTGCCATCCACAGATTTCGCGAAAAATAAAAAATATCACGCGCTGGTACCACCTTTCCCCAAACCATCAATTCCAATCCTCCCAATTTCCACAATCTTCAACCTTCAAATTCTGCTTCACCTTTCATTCATTTCACTTCAGAGAGAGAGAGAACAAAACAGAATGGGCGTCGTGGTGATCGACGGCAGCACCGTGCGCGACTTCGTGAACGACGAAACCGCCTTCACCAAGAGCGTGGACGAGCAGTTCACGGCGCTGGACCTCAACAACGACGGCGTCCTCTCGCGCTCGGAGCTCCGCACGGCCTTCGAGTCCATGCGCCTCATCGAGACGCACTTCGGCATCGACGTTTCCACGCCGCCGGAGCAGCTCGCGAAGCTCTACGACTCCATCTTCGACAAGTTCGACGGCGACCGGAGCGGCGCCGTCGACCGCCGCGAGTTCCGCGACGAGATGAGGAAGATCATGCTCGCCATCGCCGACGGCCTCGGATCGTTCCCCATAAGGATGGTCCTCGAGGACGATCCCAATAGTCTTCTTCAGAAAGCCGCGGATCTTGAAGCCTCCAAGACCTGA 675 0.5274 MNINQLSLFSKKISTFLFLFNLEYHKLKIPNPCVPSTDFAKNKKYHALVPPFPKPSIPILPISTIFNLQILLHLSFISLQREREQNRMGVVVIDGSTVRDFVNDETAFTKSVDEQFTALDLNNDGVLSRSELRTAFESMRLIETHFGIDVSTPPEQLAKLYDSIFDKFDGDRSGAVDRREFRDEMRKIMLAIADGLGSFPIRMVLEDDPNSLLQKAADLEASKT 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02135 224 ProSitePatterns EF-hand calcium-binding domain. 120 132 IPR018247 -
Gma08g02135 224 ProSiteProfiles EF-hand calcium-binding domain profile. 156 191 IPR002048 GO:0005509
Gma08g02135 224 SMART efh_1 160 188 IPR002048 GO:0005509
Gma08g02135 224 SMART efh_1 111 139 IPR002048 GO:0005509
Gma08g02135 224 Gene3D - 79 193 - -
Gma08g02135 224 Pfam EF-hand domain pair 114 186 IPR002048 GO:0005509
Gma08g02135 224 SUPERFAMILY EF-hand 103 191 IPR011992 -
Gma08g02135 224 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 88 223 - -
Gma08g02135 224 ProSitePatterns EF-hand calcium-binding domain. 169 181 IPR018247 -
Gma08g02135 224 ProSiteProfiles EF-hand calcium-binding domain profile. 107 142 IPR002048 GO:0005509
Gma08g02135 224 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN 88 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02135 Gma-Chr8 19495787 19496755 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02135 88 223 EF-hand Containing Proteins AT2G44310 73.529 2.53e-68 204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02135 08 19495787 19496755 Gma15g02084 15 38479525 38480495 GST