Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02119 ATGGCTTTAATAAGGCTTGAGCCATTTTCTGATTATTTAAGTTTTAAAATTAGAAAAGGACAAAAGATTAAGCTTCCCTCATCAGTCTCTTCCACGCACGAGACCAGAATCCCTTCCCCGTTCACGCCACTGCTTCTCCCAGCACCACCGGTGACGGACGACGGGTGCCGAACGTCGACGGACGACTTCTCTCCTCTCTGGCTTTTTTCCGATGTGGTTCAAATCCGGCGAGGTAGCTCTTCTCTCGCCCTTTTTCGGTGCTTTCCGGCGAGGTCCCATTCTCTTCGGGTTTCCGTTCAGATTTATTATACTTTTCTTACAAGGAAATCATTTGGCTGGCATGGACATAGCACATTGCTATTTAAAGGTGTTGATGTGGACACAGGTCACCTTGACATGGTTTTTAGTGAGGAAACTGCTGGGATTTTTGACATAAAATGGAGTCCAGCTGGAGGGCATGCAAGTCCTTTTCTAGCTCAAGCAGATGCTGATGGATACTTGAGGATTAAAATACTGGGGGGTTGCTGTAATGGAGTGGAAGGGGCTAATCTAAAGGAGATCACAAATGGAAAAATCAGTAACTCTATGTGCCTGTACCTGGATTGGAATCCTTCAGCTACATCCATCACAGTAGGGCTTTCTGACGGCTCTGTGTCGATTGTTTCTCTTCTTGAATCCAAGCTAGAAATACAAGATGAGTGGAAGGCACATGATTTTGAACTTTGGACAACCTCCTTTGACATCCACCAACCAAATTTGGTATACACCGGCTCTGATGATTGTAAATTCAGTTGCTGGGATTTGCGAGATAAACCTCCCAATGTGGTATTTCAGAGCTCTAAAGTCCACAAAATGGGTGTTTGTTGCATTGAGAAGAGTCCACATGACCCAAATACCTTGTTAACTGGCAGCTATGATGAATACCTAAGGGTATGGGATTTAAGATCAATGTCAAAACCCCTTAATAAGACTTCAATTAACTTGGGGGGAGGAGTTTGGAGGGTTAAGCACCACCCCTTCATTCCAGGTTTGGTTTTGGCTGCTTGTATGCACAATGGTTTTGCTATTGTCGCCATTAAAGGCAACAATGCTGAAGTGTCGGAAACTTACAAGAAGCATGATTCTCTTGCCTATGGAGCAGACTGGCAGAAACGAGAAGCAAATCACATAGGTGGGAATACCAAACCTCTAGTGGCTACTTGCTCATTCTATGACAAACTTGTTCGGGTGTGGAGGCCAGGAAATGATATTGTCTTGTAG 1260 0.4444 MALIRLEPFSDYLSFKIRKGQKIKLPSSVSSTHETRIPSPFTPLLLPAPPVTDDGCRTSTDDFSPLWLFSDVVQIRRGSSSLALFRCFPARSHSLRVSVQIYYTFLTRKSFGWHGHSTLLFKGVDVDTGHLDMVFSEETAGIFDIKWSPAGGHASPFLAQADADGYLRIKILGGCCNGVEGANLKEITNGKISNSMCLYLDWNPSATSITVGLSDGSVSIVSLLESKLEIQDEWKAHDFELWTTSFDIHQPNLVYTGSDDCKFSCWDLRDKPPNVVFQSSKVHKMGVCCIEKSPHDPNTLLTGSYDEYLRVWDLRSMSKPLNKTSINLGGGVWRVKHHPFIPGLVLAACMHNGFAIVAIKGNNAEVSETYKKHDSLAYGADWQKREANHIGGNTKPLVATCSFYDKLVRVWRPGNDIVL 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02119 419 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 280 316 - -
Gma08g02119 419 Gene3D - 177 418 IPR015943 GO:0005515
Gma08g02119 419 ProSiteProfiles Trp-Asp (WD) repeats profile. 280 322 IPR001680 GO:0005515
Gma08g02119 419 Pfam WD domain, G-beta repeat 282 313 IPR001680 GO:0005515
Gma08g02119 419 ProSitePatterns Trp-Asp (WD) repeats signature. 300 314 IPR019775 -
Gma08g02119 419 SUPERFAMILY WD40 repeat-like 124 413 IPR036322 GO:0005515
Gma08g02119 419 PANTHER DIPHTHINE METHYLTRANSFERASE 125 415 - -
Gma08g02119 419 SMART WD40_4 183 222 IPR001680 GO:0005515
Gma08g02119 419 SMART WD40_4 128 173 IPR001680 GO:0005515
Gma08g02119 419 SMART WD40_4 227 267 IPR001680 GO:0005515
Gma08g02119 419 SMART WD40_4 363 412 IPR001680 GO:0005515
Gma08g02119 419 SMART WD40_4 273 313 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02119 Gma-Chr8 19262388 19266296 Wgd