Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02109 ATGTCTGCTATTGTCTATTGTCCACCAGATGCAAATACAATGATATTGTTTATTGGCATGTTTGAATTGGAGGTAATAAGGTGGATACCTGGGGGAGATTTTGTTCTTGCACTGTTGGCTGTTGCCTCTGTTTTCCCTTGCTTGCTTTACTTCAGTCTCTCTCTGTCTCACTTTACGTTCGAGCTTCTTGCTACGATGAACGCACCCATCATTGACCCCTTACAGGGAGATTTTCCAGAAGTGATAGAGGAGTATTTGGAACATGGGTGTATGAAATGTATTGCCTTTAATCGTCGTGGTACACTTCTTGCTGCTGGGTGCAACAACGGAAGTTGCGTTATCTGGGATTTTGAAACCCGGGGCATTGCTAAAGAGCTACGAGATAATGAATGTTCATCTCCAATAACCAGTGTCTGTTGGTCAAAGTGTGGTCATCGAATTCTTGTATCTGCTGCTGACAAGTCATTGTTGCTGTGGGATGTTATGAGTGGTAAGAGGATAACAAGAATAGTTTTACAACAAACCCCTCTACAAGCTCGTCTTCATCCGGGTTCCTCTAAACCATCTCTTTGCTTGGCATGCCCTCTCTCATGTCCTCCAATGATTGTTGACTTGAACACAGGAAACACAACTTCGCTTAAAGTTTCTATCTTGGAGATATCCAATAATGGACCAACCCCTACCTCACGTAACAAGTGTGCCGATGGAATTACCTCCTTCTCACCAACTGCTGCATGTTTTAGTAAGTACGGAAACCTGGTTTATGTGGGAAACTCTAAAGGGGAAATTCTTGTAATTAACTATGTAGATGGTGAGGTGCGTGCCATGGTTCCTATACCTGGTGGTTCTGTGGTGAAGAACATTGTGTTTAGCAGGAACGGACAATATCTTCTAACAAACTCAAATGATCGAATAATCAGGATCTACGAAAATCTTCTACCCCTAAAAGAAGAAGTTAGAACACTTGATGAGCTAAATGGGAACCTCAATGATCTAAATGATGTTGAGAAGTTGAAAGCTGTAGGCTCAAAATGCCTAACTTTGTTCCGGGAGTTTCAAGATTCAATAACGAAGGTGCACTGGAAAGCACCCTGCTTCAGTGGTGACGGTGAGTGGGTTGTGGGTGGTTCTGCTAATAAAGGGGAGCACAAGATTTACGTATGGGATAGAGTTGGGCATCTTGTGAAGATCCTTGAAGGACCTAAGGAAGCCCTTATTGATTTAGCATGGCATCCTGTACGTCCTATTGTTGTATCTGTTTCTTTGAATGGCATAGTTTATATCTGGGCTAAGGATTACACCGAGAACTGGAGTGCATTTGCTCCTGATTTCAAAGAGCTCGAGGAAAATGAGGAGTATGTGGAGCGAGAAGATGAATTTGATTTGATTCCCGAGACTGAGAAGGTAAAAGGATCTGATGTTAATGAAGATGACGAAATTGACATTGTAACGGTGGAGAAAGATCCTGCTTTCAGTGACTCTGATATGTCTGAAGAAGAGTTATGTTTCCTGCCAGCAACTCCCAGTTGTGATGCTCCTGAACAGCCAGACAAGTTCGTAAATAGTTCTTCAAAGTTGGTGGACAGCAATAACTCTGGATCCCCACTTTCAGAAGAGGCTGGACCAAATGAAAATACCATGAATCATAACTCAAGTCCAGTGGAAGATGATGCTGGGGGGACACGTATCAAAAGAAAGTGGAAACCTTCAGAGAAGGTGTTGGAGTTGCAGGCAGAAAAAATGAAGAAACCCACAAAATCTGGCAAATCATCAAAATCCAAAAGTAAATATTTGGTTGATGAGGATGATGGTATTGGTTTTTATGGTGATGATCTTTCTGATGGATAA 1848 0.4215 MSAIVYCPPDANTMILFIGMFELEVIRWIPGGDFVLALLAVASVFPCLLYFSLSLSHFTFELLATMNAPIIDPLQGDFPEVIEEYLEHGCMKCIAFNRRGTLLAAGCNNGSCVIWDFETRGIAKELRDNECSSPITSVCWSKCGHRILVSAADKSLLLWDVMSGKRITRIVLQQTPLQARLHPGSSKPSLCLACPLSCPPMIVDLNTGNTTSLKVSILEISNNGPTPTSRNKCADGITSFSPTAACFSKYGNLVYVGNSKGEILVINYVDGEVRAMVPIPGGSVVKNIVFSRNGQYLLTNSNDRIIRIYENLLPLKEEVRTLDELNGNLNDLNDVEKLKAVGSKCLTLFREFQDSITKVHWKAPCFSGDGEWVVGGSANKGEHKIYVWDRVGHLVKILEGPKEALIDLAWHPVRPIVVSVSLNGIVYIWAKDYTENWSAFAPDFKELEENEEYVEREDEFDLIPETEKVKGSDVNEDDEIDIVTVEKDPAFSDSDMSEEELCFLPATPSCDAPEQPDKFVNSSSKLVDSNNSGSPLSEEAGPNENTMNHNSSPVEDDAGGTRIKRKWKPSEKVLELQAEKMKKPTKSGKSSKSKSKYLVDEDDGIGFYGDDLSDG 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02109 615 SMART WD40_4 270 310 IPR001680 GO:0005515
Gma08g02109 615 SMART WD40_4 342 389 IPR001680 GO:0005515
Gma08g02109 615 SMART WD40_4 78 116 IPR001680 GO:0005515
Gma08g02109 615 SMART WD40_4 119 160 IPR001680 GO:0005515
Gma08g02109 615 SMART WD40_4 391 430 IPR001680 GO:0005515
Gma08g02109 615 SMART WD40_4 226 267 IPR001680 GO:0005515
Gma08g02109 615 Pfam WD domain, G-beta repeat 133 160 IPR001680 GO:0005515
Gma08g02109 615 Pfam WD domain, G-beta repeat 87 116 IPR001680 GO:0005515
Gma08g02109 615 Pfam WD domain, G-beta repeat 345 389 IPR001680 GO:0005515
Gma08g02109 615 Coils Coil 315 335 - -
Gma08g02109 615 SUPERFAMILY WD40 repeat-like 83 429 IPR036322 GO:0005515
Gma08g02109 615 Gene3D - 204 482 IPR015943 GO:0005515
Gma08g02109 615 Gene3D - 59 180 IPR015943 GO:0005515
Gma08g02109 615 MobiDBLite consensus disorder prediction 506 615 - -
Gma08g02109 615 MobiDBLite consensus disorder prediction 516 555 - -
Gma08g02109 615 ProSiteProfiles Trp-Asp (WD) repeats profile. 132 169 IPR001680 GO:0005515
Gma08g02109 615 MobiDBLite consensus disorder prediction 558 586 - -
Gma08g02109 615 PANTHER RETINOBLASTOMA-BINDING PROTEIN 5 66 596 IPR037850 GO:0048188
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02109 Gma-Chr8 19131605 19137967 Transposed