Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02085 ATGAAACCCTTTGCTCCCTTTTTCTTTATGTTGTTGTTCTTGGAGGCTTTTTCCAACATCCAAGTTTGCTTGGGAGATTGTGATAATCTTCAGGACACTTGTCCAGCAGTTCCACCCAATAAGCAGACCATATTCATCAATGGTCTTCAATGCAAAAACCCAGTTAATGTAACAGCTCAAGATTTCAGGACCACAGAACTAAGCAAAGCTGGCCCTACAGACATTTTTGGTGCATCTTTGAAAATTGTGAGTGCTGCTGAGTTCAATGGTCTGAATACTCTTGGCCTCTCCATTGGAAGAATTGACCTTGATGGGAATGGCCTGGTGAACTTCCACTATCATCCTAGGGCTACTGAAATAATCTTTGTTACCAAAGGTGTGTTGTTGGCAGGTTTTGTTGACACCAAAAACCAGTTTTTCCAGAAGTTTCTTAAAGTTGGTGATGTCTTTGTGTTCCCCAAGGCTTTGTTCCACTTCTGTCTAAATACTGGTTTTGAAGAATCCACTGTTTTCTCAGTGTACAACAGCCAGAATCCTGGCTTTGTGTCCCTAAGTCCTACAACTTTTGACACAACATTGGAATCATTGGACAAGATCAAGAAGAGACTCATGTCACTCTCTGCCTCTGAAGCTTAA 636 0.4151 MKPFAPFFFMLLFLEAFSNIQVCLGDCDNLQDTCPAVPPNKQTIFINGLQCKNPVNVTAQDFRTTELSKAGPTDIFGASLKIVSAAEFNGLNTLGLSIGRIDLDGNGLVNFHYHPRATEIIFVTKGVLLAGFVDTKNQFFQKFLKVGDVFVFPKALFHFCLNTGFEESTVFSVYNSQNPGFVSLSPTTFDTTLESLDKIKKRLMSLSASEA 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02085 211 CDD cupin_OxOx 26 195 - -
Gma08g02085 211 Pfam Cupin 77 202 IPR006045 -
Gma08g02085 211 SUPERFAMILY RmlC-like cupins 47 200 IPR011051 -
Gma08g02085 211 Gene3D Jelly Rolls 25 210 IPR014710 -
Gma08g02085 211 PRINTS Germin signature 112 132 IPR001929 GO:0030145
Gma08g02085 211 PRINTS Germin signature 142 162 IPR001929 GO:0030145
Gma08g02085 211 PRINTS Germin signature 175 190 IPR001929 GO:0030145
Gma08g02085 211 ProSitePatterns Germin family signature. 107 120 IPR019780 GO:0030145
Gma08g02085 211 SMART Cupin_1_3 65 190 IPR006045 -
Gma08g02085 211 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 4 16 207 - -
Gma08g02085 211 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 16 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02085 Gma-Chr8 18770252 18771103 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02085 29 195 Miscellaneous Gene Families AT5G20630 38.690 5.61e-33 116