Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02054 ATGTCGACGGCATTTGCAAATCCGTCGCTACTCATTACAAGACCCGCCCCTCTGACACCCTCCTCCATTGTCGACGCTGTCTACGCCAGCCTCGTCTCCTCCGACCAGCTTCCCGAGGCTAACTCCATTTCTGACCCTTTAGTTCTTGATGTGGGCCAAAATCTCGTTGTTCCTCTCCCTTGCACCTGCTTCAACGGCTCTGATAACTCTCTCCCCGCGATTTACCTCTCTTATGTTGATACCTTCGCTGTCGTTGCTGCTAGGTACTTCACCACTCTCACGGATTTGATGAATGTTAATGTCATGGGAAGCACTGCTATCAACAACGGTGATATCTTCATTGTTCCAATACCCGATAATTAA 363 0.4931 MSTAFANPSLLITRPAPLTPSSIVDAVYASLVSSDQLPEANSISDPLVLDVGQNLVVPLPCTCFNGSDNSLPAIYLSYVDTFAVVAARYFTTLTDLMNVNVMGSTAINNGDIFIVPIPDN 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02054 120 Pfam LysM domain 80 116 IPR018392 -
Gma08g02054 120 Pfam LysM domain 31 58 IPR018392 -
Gma08g02054 120 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 21 118 - -
Gma08g02054 120 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 1 21 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02054 Gma-Chr8 18429220 18429582 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02054 22 117 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 61.000 1.19e-36 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02054 - - gmx:100777292 171.785