Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01644 atggattgtttctgctgcttcaacaatcagGTGGTTGGAGGACGCACTTCATGTGGCTCTGGCAAGGGCAAGAGCCATCAGGGCTCAGTTAAGTATGGCTTTAGCCTAGTTAAAGGGAAAGCAAACCACCCAATGGAGGACTATCATGTAGCAAAAATTGTCAAGCTTGGAGGGCAAGAGTTAGGACTTTTTGCTATATATGACGGACACTTGGGAGACAGTGTGCCTGCCTATTTACAAAAGCATCTCTTTTCTAATATCTTGAAGGAGGAGGACTTCTGGACTGATCCAGCCAGTTCCATCATTAAAGCCTATGAGACAACAGATCAGGCCATTCTTTCTGATAGTTCTGATTTGGGGCGAGGAGGATCAACTGCAGTGACTGCAATTCTTATTGATAATCAGAAGTTATGGGTAGCAAATGTTGGAGACTCACGAGCAGTTTTGTCGAGAAAAGGGGTGGCCGAACAGATGACTATTGATCATGAGCCCAATACTGAGAGGGGCATCATTGAGAACAAAGGCGGCTTTGTCTCAAACATGCCAGGAGACGTTGCAAGAGTAAATGGGCAGCTTGCAGTTTCTCGAGCATTTGGAGACAAAAATTTAAAATCACACTTACGATCTGATCCTGATATACGACATGTTGATATTGACCCAGATGCTGAGCTTTTGATACTTGCCAGTGATGGTCTTTGGAAGGTAATGGCAAACCAAGAGGCAGTTGATATTGCACGAAGGATAAAAGATCCACAAAAGGCAGCTAAACAACTAGTTGCCGAGTCATTGAACAGAGAGAGTAAGGATGATATTTCGTGCATTGTAGTTCGTTTCAAGGGATGA 843 0.4247 MDCFCCFNNQVVGGRTSCGSGKGKSHQGSVKYGFSLVKGKANHPMEDYHVAKIVKLGGQELGLFAIYDGHLGDSVPAYLQKHLFSNILKEEDFWTDPASSIIKAYETTDQAILSDSSDLGRGGSTAVTAILIDNQKLWVANVGDSRAVLSRKGVAEQMTIDHEPNTERGIIENKGGFVSNMPGDVARVNGQLAVSRAFGDKNLKSHLRSDPDIRHVDIDPDAELLILASDGLWKVMANQEAVDIARRIKDPQKAAKQLVAESLNRESKDDISCIVVRFKG 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01644 280 SMART PP2C_4 27 276 IPR001932 -
Gma08g01644 280 ProSiteProfiles PPM-type phosphatase domain profile. 31 278 IPR001932 -
Gma08g01644 280 Gene3D - 16 280 IPR036457 -
Gma08g01644 280 Pfam Protein phosphatase 2C 40 271 IPR001932 -
Gma08g01644 280 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 5 279 - -
Gma08g01644 280 PANTHER PROTEIN PHOSPHATASE 2C 5 279 IPR015655 GO:0004722|GO:0006470
Gma08g01644 280 CDD PP2Cc 30 278 IPR001932 -
Gma08g01644 280 SUPERFAMILY PP2C-like 28 279 IPR036457 -
Gma08g01644 280 SMART PP2C_SIG_2 42 278 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01644 Gma-Chr8 14626473 14631285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01644 1 279 PP2C-type Phosphatase Gene Family AT1G22280 70.383 1.39e-145 408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01644 08 14626473 14631285 Gma08g01644 08 14626473 14631285 ECH