Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01603 ATGGAGGATAATAATCAATGGTGTCTCTATGACCATGACCCACTTCTTCTCACAGACGTTTCTTTGCAGCAAGAATCCTCTTCTTATACTCACTGCCCCAATTCTCTTTCACAAGCATCACTGAGCTCTCGGAGTTTGGCTATGGCGGATGAGCCTGTGTCTCGTGGTGACAGCCCCAGCATCGGGTTTTCTCAGGAAAATGGAAGATTTGAAGGGAACAGCGTGAAATTCGATGACCCAAATGTGAAAAATGTGTTTGATGGAAGATCAATTTTGGGGTATTCTCTTACATCCCCAGATTTGGTCATTTGTGGCTCGCCAGATATTGCTGGAATCAGCTATGGTGATTCCCCTGAGTTGTCGAAGAACAAACATTCCAAGGATGTGGAGCAATCTATGGAGCTTTCTCTAGAGAATGGAATCAAGGGGTCTCAAGTAGAAGTTGACAATGGCCATAAGATCCCAACTGTTAAATTCTCCAACTTCTGTCAAACTTTTGAGCAAGAGGAAAAGCCACTGTCCCCTGAAGCCTCCTTTGAGCTTCTTCCACCTCTTGTAACCAGGAATGAGTCACCCCAAGATCACCCTCCTAGAGATACTGAGATGCTTGAAGATATTGGAGTGTCTCAGGAGGCAGAAATGGAGTCTTCAGAAGATACCGAGGATATTGGGATGGAAGAGAAGTTTAAGAGACTGAAAAGAGAGTTTGACTGTCAGAGAAAGGAGCTGACGGAAACAAGGAGGGAGTTGGGGGAGATCAAGAGAGAGAATCAACAGAAGAGTAGAGAATGCCAAGAAGCTTGGAACTCCTTGAAAGAACTTCAAAATGAGCTAATGCGCAAGTCCATGCACGTTGGATCTTTGGCATTTGCCATTGAGGGGCAAGTGAAGGAGAAAAGTAAGTGGTTTTCATCACTGAGAGACTTGACGAGGAAATTGAAGATCATGAAAATGGAACACATCAAGCTATTAGAGGAAGCAGAGGCAAGCAAAAAATATCAAGCAGATATGAGAGAAATGGGACTTATTATCAAGTCCAAAATAAATGAACAGCTGGAGTCACATGAAGATCTCAAGTCCAAATATATTGAAGGGGCTAAGGAACGGAAAGATCTTTACAACAAGGTTTTGGAGTTGACAGGAAACATAAGGGTCTTTTGCCGTTGTAGGCCTCTCAATGCCGAAGAGATATCTGCAGGAGCAACAATGGCCTTACATTTTGAATTTGCGAAAGATGGTGATTTAACTGTAATGTCAAATGGAGCTCCTAAAAGGAATTTCAAGTTCGATGCTGTCTTTGGTCCCCAAGCTGAGCAAGCTGATATTTTTGAAGACACAGCACCATTTGCAACCTCAGTTCTAGATGGATACAATGTATGCATTTTTGCATATGGACAGACTGGGACAGGAAAAACTTTCACAATGGAGGGCACAGAAGAGGCTCGAGGTGTTAATTTCAGGACTCTTGAGAAAATGTTTGACATAATCAAGGAGAGACAAAAGCTCTATTGTTATGATATCTCTGTAAGTGTCTTAGAAGTGTACAATGAACAAATAAGAGATTTGCTGGTTGCAGGAAATCATCCTGGAACAGCTGCAAAAAGACTTGAAATAAGGCAAGCTGGTGAAGGAATGCATCACATTCCAGGGTTAGTTGAAGCACATGTGAACAATATGACTGAAGTCTGGGAAGTCCTACAAACTGGTAGCAATGCAAGGGCAGTAAGCTCAACCAATGCCAATGAGCATAGCAGCCGATCTCACTGCATTCACTGTGTTATGGTTAAGGGAGAGAATTTGTTGAATGGGGAATGCACAAGAAGCAAGTTATGGCTGGTGGACCTAGCAGGCAGCGAGCGAGTGGCAAAGACAGAAGTGCATGGAGATAGACTGAAGGAGACACAAAATATTAATAGGTCTCTCTCTGCACTTGGTGATGTCATATCAGCTCTTGCAACAAAAAGTTCACACATTCCTTTCAGGAACTCCAAGCTTACACACTTGCTGCAAGACTCATTAGGAGGAGATTCAAAGGCACTCATGTTTGTACAGATCAGTCCTAATGAAAACGATTTGAGTGAGACAATTTGCTCTCTGAACTTTGCTAGTAGAGTAAGAGGAATAGAATTGGGACCTGCAAGAAAGCAGTTGGACACTGTTGAACTTTTGAGACACAAACAAATGGCTGAGAAAGTCAAACAAGAGGTAAGGCTGAAGGATTTGCAAATCAAGAAGATGGAGGAAACAATCCATGGATTGGAGTCCAAGATGAAGGAAAGCGACAATAAGAACAAAAATCTCCAAGAGAAGGTCAAGGAACTGGAATCACAACTTCTGGTTGAGAGAAAGCTGGCGCGTCAACATGTAGACTCAAAGATAGCTGAGCAGCACCAAATGAAACATCAAGAAGAGCAAAACAATACACTTATGAGACCAGCACTTGCAAGTAGACCACTAGGAAGTCTCAAGAATTTCAATGATCCAGTGAGTGGTGGTGGATGGTGCAAAGACCAACAAATAAATTCAGCTAAACCACTCGCTGAGAACAACATCTTGAAACCTTGTATACCCTTTTCTACAATGGAGAGCTCCATCAAGTGCATTGATCATGCTGAGAAAGAAAACAATCCTGACATGGCTGACAAGGCTCTATTGCCAAAAAGGCCTGGAAGAGCTTCTACTATATGCATGATGACACCGCGTGTTCCTTCAGCCATTGCCTCAAGGAGAAACTCTCTGATTCCACTCCCAAGTATACCTAGCTTAACACAGTTCCAGTCACCATTATTACCAAAGTTAACAAACCAAGCTGATCAGAAGGATGTCAATGGGGAATTAGAAACCAACTGTGTGCCTGCACAGACTCATTGTGAGAGTCCCAAAGAAGTTAGAATTGGTGTTAAGAGGATTGGTAGCATACTAAGAAGAAGCCTTCATAAGAAAATACAGATGAAGTCTCCTCTTCAGCAGCACATGAGGAAGGTTGGTGTGAATGTAGGGATGGAGAAAGTTAGAGTTTCCATTGGAAGTAGGGGGAGATTGGCACCAAGGGGCCAAGTAGGAAGTGGTAGAAGAGGAGGAGGAGCTAAAGATATTCAACAAAAGAATAGTCAAAAGGAGAAGGAAAGGGGATGGATTTGA 3141 0.4276 MEDNNQWCLYDHDPLLLTDVSLQQESSSYTHCPNSLSQASLSSRSLAMADEPVSRGDSPSIGFSQENGRFEGNSVKFDDPNVKNVFDGRSILGYSLTSPDLVICGSPDIAGISYGDSPELSKNKHSKDVEQSMELSLENGIKGSQVEVDNGHKIPTVKFSNFCQTFEQEEKPLSPEASFELLPPLVTRNESPQDHPPRDTEMLEDIGVSQEAEMESSEDTEDIGMEEKFKRLKREFDCQRKELTETRRELGEIKRENQQKSRECQEAWNSLKELQNELMRKSMHVGSLAFAIEGQVKEKSKWFSSLRDLTRKLKIMKMEHIKLLEEAEASKKYQADMREMGLIIKSKINEQLESHEDLKSKYIEGAKERKDLYNKVLELTGNIRVFCRCRPLNAEEISAGATMALHFEFAKDGDLTVMSNGAPKRNFKFDAVFGPQAEQADIFEDTAPFATSVLDGYNVCIFAYGQTGTGKTFTMEGTEEARGVNFRTLEKMFDIIKERQKLYCYDISVSVLEVYNEQIRDLLVAGNHPGTAAKRLEIRQAGEGMHHIPGLVEAHVNNMTEVWEVLQTGSNARAVSSTNANEHSSRSHCIHCVMVKGENLLNGECTRSKLWLVDLAGSERVAKTEVHGDRLKETQNINRSLSALGDVISALATKSSHIPFRNSKLTHLLQDSLGGDSKALMFVQISPNENDLSETICSLNFASRVRGIELGPARKQLDTVELLRHKQMAEKVKQEVRLKDLQIKKMEETIHGLESKMKESDNKNKNLQEKVKELESQLLVERKLARQHVDSKIAEQHQMKHQEEQNNTLMRPALASRPLGSLKNFNDPVSGGGWCKDQQINSAKPLAENNILKPCIPFSTMESSIKCIDHAEKENNPDMADKALLPKRPGRASTICMMTPRVPSAIASRRNSLIPLPSIPSLTQFQSPLLPKLTNQADQKDVNGELETNCVPAQTHCESPKEVRIGVKRIGSILRRSLHKKIQMKSPLQQHMRKVGVNVGMEKVRVSIGSRGRLAPRGQVGSGRRGGGAKDIQQKNSQKEKERGWI 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01603 1046 Gene3D Kinesin motor domain 324 710 IPR036961 -
Gma08g01603 1046 Coils Coil 729 784 - -
Gma08g01603 1046 PRINTS Kinesin heavy chain signature 456 477 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma08g01603 1046 PRINTS Kinesin heavy chain signature 578 595 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma08g01603 1046 PRINTS Kinesin heavy chain signature 609 627 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma08g01603 1046 PRINTS Kinesin heavy chain signature 658 679 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma08g01603 1046 Coils Coil 306 326 - -
Gma08g01603 1046 ProSitePatterns Kinesin motor domain signature. 608 619 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gma08g01603 1046 CDD KISc_C_terminal 381 710 - -
Gma08g01603 1046 PANTHER KINESIN-LIKE PROTEIN KIN-14Q 216 1031 - -
Gma08g01603 1046 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 382 746 IPR027417 -
Gma08g01603 1046 SMART kinesin_4 380 716 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma08g01603 1046 Coils Coil 229 277 - -
Gma08g01603 1046 MobiDBLite consensus disorder prediction 1008 1046 - -
Gma08g01603 1046 Pfam Kinesin motor domain 388 708 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma08g01603 1046 ProSiteProfiles Kinesin motor domain profile. 382 708 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma08g01603 1046 PANTHER KINESIN-LIKE PROTEIN KLP-3 216 1031 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01603 Gma-Chr8 14216471 14221561 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01603 357 735 Calmodulin-binding Proteins AT5G65930 42.408 1.61e-80 285
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01603 08 14216471 14221561 Gma08g01603 08 14216471 14221561 ECH