Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01553 ATGCCCCTCTCACCCTCTTCCATGGCTTCAATCCCACAATTCTATCAAAACTACACGTTCACCACTCACGATCTTTCCGACTACCCTACCCCTCTTCTCAATGGCGGTGGTGGCAGCAACGACATCGTTAATGCGTCGGTTATGGACACCACCACCGTGTGGGGTGGTGGGCAAGATAGCTTGATTAATATTCCTGTGCTGGATATGAACAATGGTGCACTTGATCATATTGTGTCGCTTGATTGCGACACCATGGCTTGTGCTGCTAATTGGATGCCATCTTTTTCTGAGCAGCTTGGGGGGTTTTCGGATTTGGCCATTTCGGACTGCAAAATGGGGTTCTATGGAGGGTTTCAGAGTTTCAACAACAGCAGATCGTACCAACCTCATGTTGGGGAGTTTGGAGATGAATGTTGTGGGTTTGTGGAGGATGTTAAGCCACCTGCTTATCCTAATGCTGCCAGAGAAAATTGGGGAATTCAAGGTAATCAAATGGCAGCAATTGAAGAGCCTAACATAAAGGTAGGAAGGTACTCAGAAGAAGAGAGGAAAGAAAGAATTCTCCGATATTTGaagaaaagaaatcaaagaaactttaacaaaaccatcaagTACGCATGTCGGAAAACCTTAGCTGATAGGCGAGTAAGGGTTAGGGGAAGGTTTGCAAGAAACAATGAGCTTTGTGAAGAAGACATGGCAACAAAAAAGCATCAGAATCATCATCACCACAAAGGAGATTTTTATGGTGGCGATTCAATCCAGTTCCAGTTAAAGAATGATGAGGAGGATTGGCTTCAAGAGGCCATGGCAAGTCTAGTGTATTTATCTCATTCTTCACCGGAAGATATGTAA 855 0.4304 MPLSPSSMASIPQFYQNYTFTTHDLSDYPTPLLNGGGGSNDIVNASVMDTTTVWGGGQDSLINIPVLDMNNGALDHIVSLDCDTMACAANWMPSFSEQLGGFSDLAISDCKMGFYGGFQSFNNSRSYQPHVGEFGDECCGFVEDVKPPAYPNAARENWGIQGNQMAAIEEPNIKVGRYSEEERKERILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNELCEEDMATKKHQNHHHHKGDFYGGDSIQFQLKNDEEDWLQEAMASLVYLSHSSPEDM 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01553 284 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 8 279 - -
Gma08g01553 284 Pfam CCT motif 183 225 IPR010402 GO:0005515
Gma08g01553 284 ProSiteProfiles CCT domain profile. 183 225 IPR010402 GO:0005515
Gma08g01553 284 PANTHER ACTIVATOR OF SPOMIN::LUC2 8 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01553 Gma-Chr8 13725221 13727377 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01553 179 233 C2C2-CO-like Transcription Factor Family AT5G57660 47.273 2.13e-10 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma08g01553 CCT 8.9e-17 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01553 08 13725221 13727377 Gma08g01553 08 13725221 13727377 ECH