Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01499 ATGGAGAGAATGTTCCCTCCCAAGAAGCCCTCTACTATGAATTCCCATGACAGACCCATGTGTGTTCAAGGAGACTCGGGTCTTGTCCTCACCACTGACCCTAAACCTCGCCTCCGTTGGACTGTTGAGCTCCATGAACGCTTTGTTGATGCTGTTACTCAGCTTGGAGGGCCTGATAAGGCCACTCCTAAAACCATCATGAGGGTTATGGGTGTGAAGGGTCTCACCCTTTACCACCTCAAGAGCCACCTCCAGAAATTTAGGCTTGGCAAGCAGCCCCACAAGGATTTCAATGATCACTCGATTAAGGATGGTATGAGAGCTTCGGCTTTAGAACTGCAGCGAAACACTGCTTCCTCTTCTGCCATGATTGGCCGCAACATGAATGATAACTCACACATGGTTGATGCGATTAGGATGCAAATAGAGGTGCAGAGAAGACTTCATGAACAACTTGAGGTTCAAAAACACCTTCAGCTAAGGATTGAGGCTCAAGGGAAATACATGCAAAGCATATTGGAGAAGGCTTATCAAACCCTTGCTGGTGAAAACATGGCATCTGCAGCAACTAACTTAAAGAGTGCTATTGTACCTCATCATCAAGGAATCCCTGACATGGGAGTAGTGATGAAGGAGTTTGGTTCCCCTCTTGGTTTTTCTTCATTCCAAGACCTTGAGAACATTTATGGAGGTAACCAAATTGACCTTCAGCAGAACATGGAGAAGCCATCCCTTGATCATGGTTTCATGCCAATCAATGAGAGCTTGTGTTTGGGGAAGAAGAGGTCCAATAACCCTTATAGTGGGAGTGGTAAGAACCCTTTGATTTGGAGTGATGATCTAAGGCTTCAAGATTTGGGAGGGCCAGCATCATCATGCCTTGGCCCTCAAGATGACCCTTTCAAAGGTGACCAGATTCAGATTGCACCACCAGGATCATTGGATAGAGGAGCTAGCACTGACATTGATCCCATGTCAGAGATCTATGACTCAAAACCTGTGCTTCAGAGTGAAGAGAAAAAGTTTGATGCATCATCTATGAAGCTTGAAAGGCCTTCACCAAGAAGAGCACCTCTTCAGCCTGAAAGGATGAGCCCTATGATCAGCACTGGTACCATGGCACAAGGTAGAGGCTCACCATTTGGGTGA 1149 0.4639 MERMFPPKKPSTMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKDFNDHSIKDGMRASALELQRNTASSSAMIGRNMNDNSHMVDAIRMQIEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLAGENMASAATNLKSAIVPHHQGIPDMGVVMKEFGSPLGFSSFQDLENIYGGNQIDLQQNMEKPSLDHGFMPINESLCLGKKRSNNPYSGSGKNPLIWSDDLRLQDLGGPASSCLGPQDDPFKGDQIQIAPPGSLDRGASTDIDPMSEIYDSKPVLQSEEKKFDASSMKLERPSPRRAPLQPERMSPMISTGTMAQGRGSPFG 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01499 382 MobiDBLite consensus disorder prediction 333 350 - -
Gma08g01499 382 MobiDBLite consensus disorder prediction 288 382 - -
Gma08g01499 382 Pfam MYB-CC type transfactor, LHEQLE motif 134 179 IPR025756 -
Gma08g01499 382 MobiDBLite consensus disorder prediction 1 20 - -
Gma08g01499 382 Gene3D - 34 92 - -
Gma08g01499 382 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 35 90 IPR006447 GO:0003677
Gma08g01499 382 SUPERFAMILY Homeodomain-like 34 90 IPR009057 -
Gma08g01499 382 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 334 IPR044848 GO:0003700
Gma08g01499 382 Pfam Myb-like DNA-binding domain 38 86 IPR001005 -
Gma08g01499 382 PANTHER MYB FAMILY TRANSCRIPTION FACTOR APL 4 334 - -
Gma08g01499 382 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 92 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01499 Gma-Chr8 13123791 13126438 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma08g01499 Myb_DNA-binding 2.1e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01499 08 13123791 13126438 Gma08g01499 08 13123791 13126438 ECH
Gma15g02509 15 52800671 52803320 Gma08g01499 08 13123791 13126438 GST