Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01496 ATGGGCCACCGTTGCTGCAGCAAGCAGAAGATCAAAAGAGGGTTATGGTCTCCTGAAGAAGATGAGAAACTTCTTAGATATATCAACACACATGGACATAAAAGTTGGAGTTCAGTGCCAAAATTTGCAGGCTTGCAAAGATGTGGGAAGAGTTGCAGGTTGAGATGGATTAATTATCTGCGGCCAGATCTGAAGAGGGGTTCCTTCACTGCTGAAGAAGAGCAGATCATAATTGACATCCATAGAATTCTTGGAAACAGATGGGCACAAATAGCCAAGCACCTACCAGGAAGAACAGACAATGAGGTCAAGAATTTCTGGAACTCATGCATAAAAAAGAAGCTCATTTCACAAGGCTTAGATCCACAAACCCACACTCTCCTGTCTTCTCATAGGAGAAGCTCAGCATGTACCATCTCCAATAATATCCATCAAAATTCCAATTCCATTTTCATTATGAGTTCACACATACCAAATGCACCCTTTGAAACTACTTGTCAAACCTTTTCTACATTACCTAAACCTCCACCAAACATTGTTCAAACCCCCTCTAGCATTGTTTCCTCAGAATTTCAAACATTATCAACTATTCTTTCAGATGATGGAGAACCCCTCCAACATTTGCCTTATGAACTATTAATGGAAAACGCCACCAACATTTGTTCACCTACATACATGAACCCCTCAGCAGTTGAATTGTGTAACGATGACAACAATGTGAATTGGGTTTCAAGACTTAATGTTCATGATTTCAGTGCTCAAACACTGGAAGAAGGAGCACAAGTACTGCAGGTGCAGCAAGAGAAGGGCAAAACTTTTGATGATAAGGGAAGTGATGTGAGAGAAGCTAACAAGGGAAATCTTGAAACCAGTGTTTCTTTTGAGAGTTCTAACTTTGATCTTGGGTTTTTGGAGAGTGTACTTACCTCTGAATTCATCTCTCATGATCTCAATTGTATGGATGAACTTGCATGGAACTTTTAG 984 0.4024 MGHRCCSKQKIKRGLWSPEEDEKLLRYINTHGHKSWSSVPKFAGLQRCGKSCRLRWINYLRPDLKRGSFTAEEEQIIIDIHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLISQGLDPQTHTLLSSHRRSSACTISNNIHQNSNSIFIMSSHIPNAPFETTCQTFSTLPKPPPNIVQTPSSIVSSEFQTLSTILSDDGEPLQHLPYELLMENATNICSPTYMNPSAVELCNDDNNVNWVSRLNVHDFSAQTLEEGAQVLQVQQEKGKTFDDKGSDVREANKGNLETSVSFESSNFDLGFLESVLTSEFISHDLNCMDELAWNF 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01496 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Gma08g01496 327 Gene3D - 67 138 - -
Gma08g01496 327 CDD SANT 68 108 IPR001005 -
Gma08g01496 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Gma08g01496 327 Pfam Myb-like DNA-binding domain 66 109 IPR001005 -
Gma08g01496 327 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Gma08g01496 327 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Gma08g01496 327 SMART sant 12 62 IPR001005 -
Gma08g01496 327 SMART sant 65 113 IPR001005 -
Gma08g01496 327 CDD SANT 16 60 IPR001005 -
Gma08g01496 327 Gene3D - 13 65 - -
Gma08g01496 327 PANTHER MYB DOMAIN PROTEIN 55 1 315 - -
Gma08g01496 327 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Gma08g01496 327 PANTHER BNAC05G40480D PROTEIN 1 315 - -
Gma08g01496 327 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01496 Gma-Chr8 13070203 13072176 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma08g01496 Myb_DNA-binding 2.9e-15 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01496 08 13070203 13072176 Gma08g01496 08 13070203 13072176 ECH
Gma15g02514 15 52881956 52883679 Gma08g01496 08 13070203 13072176 GST