Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00864 ATGGAAAACAACCATGTTCAGCTTTTGGTTCATCTCACCGTGACACTTCTTCTTGTGATCACTGTTTTGTTTCCTTTGACTGAAGGTGCAGCAGCAGTTTCCTCCATCAAGACTGATGCACAGGCTCTTCTCATGTTCAAAAGGATGATTCAGAAGGATCCAAGTGGAGTTTTGTCAGGGTGGAAGCTGAATAAGAATCCATGCAGCTGGTATGGAGTCACTTGCACCCTTGGAAGAGTTACTCAGCTTGATATTAGTGGAAGTAATGACCTTGCTGGGACTATATCTCTTGACCCTTTGTCTTCTTTAGATATGTTGTCTGTTCTGAAATTGTCTTTGAATTCATTTTCTGTAAATTCTACCTCTTTGGTTAATCTCCCATATAGTTTGACACAGCTTGATCTATCCTTTGGTGGAGTTACAGGTCCTGTGCCTGAGAACCTGTTCTCCAAGTGTCCAAATCTTGTTGTTGTGAATCTTTCTTACAACAACTTGACAGGCCCTATTCCTGAAAATTTCTTTCAAAATTCTGATAAACTGCAGGTCCTTGACCTCTCTTCCAACAATCTGTCAGGGCCTATTTTTGGCCTGAAAATGGAGTGCATTTCCTTGTTGCAACTTGATCTATCAGGAAACCGTTTGTCAGACTCAATTCCACTATCCTTGTCAAACTGCACCAGCCTTAAAAATTTGAATTTAGCCAACAATATGATTTCTGGGGATATCCCCAAAGCTTTTGGTCAGCTAAACAAACTACAGACTTTGGATCTTTCCCACAATCAACTTATTGGTTGGATCCCTTCTGAATTCGGAAATGCATGTGCTTCCCTTTTGGAACTCAAACTTTCTTTCAACAACATCTCAGGCTCAATCCCATCTGGTTTCTCCTCTTGCACTTGGCTGCAGCTTCTTGATATATCTAACAACAATATGTCAGGGCAGTTACCAGATTCAATCTTTCAGAACCTTGGATCATTACAGGAACTGAGGCTGGGAAATAATGCTATCACTGGTCAATTTCCATCTTCACTATCTTCCTGCAAAAAGTTGAAGATTGTGGATTTCAGCTCAAATAAATTTTATGGATCTCTCCCCAGAGATTTATGTCCAGGAGCAGCCTCACTTGAGGAGCTGAGAATGCCAGATAATCTCATTACAGGAAAAATCCCAGCTGAACTGTCAAAGTGCTCACAGCTGAAGACACTTGATTTTAGTCTGAACTATCTCAATGGTACAATCCCTGATGAGCTTGGAGAACTTGAAAATCTTGAGCAGCTAATAGCATGGTTCAATGGCTTGGAAGGAAGAATTCCACCAAAGTTGGGCCAGTGCAAGAATCTCAAGGATCTCATACTGAATAATAATCACCTCACAGGCGGAATTCCCATTGAGTTGTTCAATTGCAGCAATCTTGAATGGATATCACTGACAAGCAATGAACTCAGTGGCGAAATACCGCGCGAGTTTGGCCTCTTGACAAGGTTAGCAGTTTTGCAGCTTGGAAACAACAGCCTGTCTGGGGAGATACCATCAGAGCTAGCAAATTGCAGCAGTTTGGTGTGGTTGGACTTGAACAGCAACAAGCTCACTGGAGAGATCCCTCCAAGACTTGGAAGGCAGCAAGGAGCAAAATCCTTGTTTGGTATCCTTTCAGGGAACACTTTGGTGTTTGTAAGAAATGTTGGAAACTCATGTAAAGGGGTTGGAGGTTTGCTAGAATTCTCCGGTATTCGACCTGAAAGACTCTTGCAGGTTCCAACATTGAGGACTTGTGATTTCACAAGACTCTATTCTGGTCCTGTCCTCAGCCTGTTCACCAAGTACCAGACTCTGGAGTATCTTGATCTTTCCTATAACGAGCTCCGTGGAAAAATCCCAGATGAATTTGGAGATATGGTGGCTTTACAGGTTCTTGAATTATCTCACAATCAGTTGTCTGGAGAAATCCCTTCGTCACTTGGCCAGCTAAAAAATTTGGGTGTGTTTGATGCATCACACAATAGACTGCAGGGTCATATCCCAGACTCATTCTCAAACCTCTCATTCTTAGTCCAAATTGATCTATCTAACAATGAGTTAACAGGGCAGATTCCATCTAGGGGACAACTAAGTACACTTCCAGCTTCTCAGTATGCAAATAACCCAGGCCTTTGTGGGGTACCATTGCCTGATTGCAAGAATGATAACAGCCAACCCACAACAAATCCAAGTGATGATATTAGCAAAGGAGGCCATAAATCAGCAACTGCAACATGGGCAAACAGCATTGTCATGGGAATTCTCATCTCTGTTGCTTCTGTATGTATCTTAATTGTGTGGGCAATTGCAATGCGCGCAAGGAGGAAGGAGGCTGAGGAAGTCAAGATTCTCAATAGCTTACAAGCATGCCATGCTGCTACAACATGGAAAATTGACAAAGAGAAAGAGCCATTAAGCATTAATGTGGCTACATTTCAGAGGCAGCTGAGGAAGCTCAAGTTCTCACAACTGATTGAAGCAACAAATGGCTTCTCAGCAGCAAGTCTCATTGGGTGTGGTGGTTTTGGTGAAGTGTTCAGGGCCACACTCAAAGATGGCTCGAGTGTCGCCATAAAGAAGCTCATTCGACTGAGCTGCCAGGGCGATCGAGAATTCATGGCAGAGATGGAAACCTTAGGGAAGATCAAGCACAGAAATCTTGTCCCTTTGTTGGGGTACTGCAAAGTAGGGGAGGAGAGGCTCCTTGTTTATGAGTACATGGAGTATGGAAGCCTAGAAGAGATGCTTCATGGGAGGATCAAGACACGTGATCGACGCATTTTGACATGGGAAGAAAGGAAGAAGATTGCAAGAGGTGCTGCTAAAGGACTTTGTTTCCTGCACCACAATTGCATCCCTCATATAATACACAGAGACATGAAATCAAGCAATGTGCTACTTGACCATGAAATGGAGTCCAGGGTCTCAGATTTTGGCATGGCAAGACTAATAAGTGCCCTTGACACACATCTTAGCGTGAGCACACTAGCAGGAACACCTGGATATGTTCCCCCAGAGTACTACCAAAGTTTCAGGTGCACTGCCAAGGGAGATGTCTACTCATTTGGAGTTGTGATGTTGGAACTGCTTAGTGGTAAACGCCCTACTGACAAGGAGGACTTTGGTGACACCAACTTGGTGGGGTGGGCGAAGATTAAGATCTGCGAAGGGAAGCAAATGGAAGTGATTGACAATGATTTGCTTTTGGCCACTCAAGGAACTGATGAAGCAGAAGCAGAAGCCAAAGAAGTGAAGGAGATGATAAGATATTTAGAGATCACTATGCAGTGTGTTGATGACTTGCCTTCAAGAAGGCCAAACATGTTGCAGGTAGTCGCAATGCTGAGAGAGCTTATGCCTGGATCAACTGATGGAAGCAGCAACAGTGCTTGA 3411 0.4351 MENNHVQLLVHLTVTLLLVITVLFPLTEGAAAVSSIKTDAQALLMFKRMIQKDPSGVLSGWKLNKNPCSWYGVTCTLGRVTQLDISGSNDLAGTISLDPLSSLDMLSVLKLSLNSFSVNSTSLVNLPYSLTQLDLSFGGVTGPVPENLFSKCPNLVVVNLSYNNLTGPIPENFFQNSDKLQVLDLSSNNLSGPIFGLKMECISLLQLDLSGNRLSDSIPLSLSNCTSLKNLNLANNMISGDIPKAFGQLNKLQTLDLSHNQLIGWIPSEFGNACASLLELKLSFNNISGSIPSGFSSCTWLQLLDISNNNMSGQLPDSIFQNLGSLQELRLGNNAITGQFPSSLSSCKKLKIVDFSSNKFYGSLPRDLCPGAASLEELRMPDNLITGKIPAELSKCSQLKTLDFSLNYLNGTIPDELGELENLEQLIAWFNGLEGRIPPKLGQCKNLKDLILNNNHLTGGIPIELFNCSNLEWISLTSNELSGEIPREFGLLTRLAVLQLGNNSLSGEIPSELANCSSLVWLDLNSNKLTGEIPPRLGRQQGAKSLFGILSGNTLVFVRNVGNSCKGVGGLLEFSGIRPERLLQVPTLRTCDFTRLYSGPVLSLFTKYQTLEYLDLSYNELRGKIPDEFGDMVALQVLELSHNQLSGEIPSSLGQLKNLGVFDASHNRLQGHIPDSFSNLSFLVQIDLSNNELTGQIPSRGQLSTLPASQYANNPGLCGVPLPDCKNDNSQPTTNPSDDISKGGHKSATATWANSIVMGILISVASVCILIVWAIAMRARRKEAEEVKILNSLQACHAATTWKIDKEKEPLSINVATFQRQLRKLKFSQLIEATNGFSAASLIGCGGFGEVFRATLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKVGEERLLVYEYMEYGSLEEMLHGRIKTRDRRILTWEERKKIARGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDHEMESRVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSFGVVMLELLSGKRPTDKEDFGDTNLVGWAKIKICEGKQMEVIDNDLLLATQGTDEAEAEAKEVKEMIRYLEITMQCVDDLPSRRPNMLQVVAMLRELMPGSTDGSSNSA 1136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00864 1136 Gene3D Ribonuclease Inhibitor 38 150 IPR032675 -
Gma08g00864 1136 SUPERFAMILY L domain-like 61 317 - -
Gma08g00864 1136 PRINTS Leucine-rich repeat signature 180 193 - -
Gma08g00864 1136 PRINTS Leucine-rich repeat signature 249 262 - -
Gma08g00864 1136 Gene3D Transferase(Phosphotransferase) domain 1 913 1133 - -
Gma08g00864 1136 Coils Coil 1080 1100 - -
Gma08g00864 1136 SMART LRR_typ_2 420 444 IPR003591 -
Gma08g00864 1136 SMART LRR_typ_2 517 540 IPR003591 -
Gma08g00864 1136 SMART LRR_typ_2 249 272 IPR003591 -
Gma08g00864 1136 SMART LRR_typ_2 152 176 IPR003591 -
Gma08g00864 1136 SMART LRR_typ_2 492 516 IPR003591 -
Gma08g00864 1136 SMART LRR_typ_2 323 347 IPR003591 -
Gma08g00864 1136 SMART LRR_typ_2 445 468 IPR003591 -
Gma08g00864 1136 SMART LRR_typ_2 632 656 IPR003591 -
Gma08g00864 1136 SMART LRR_typ_2 201 225 IPR003591 -
Gma08g00864 1136 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 28 1125 - -
Gma08g00864 1136 Pfam Leucine rich repeat N-terminal domain 37 75 IPR013210 -
Gma08g00864 1136 CDD STKc_IRAK 843 1124 - -
Gma08g00864 1136 ProSitePatterns Protein kinases ATP-binding region signature. 843 866 IPR017441 GO:0005524
Gma08g00864 1136 Pfam Brassinosteroid receptor island domain 547 605 IPR045381 -
Gma08g00864 1136 Pfam Leucine rich repeat 604 645 IPR001611 GO:0005515
Gma08g00864 1136 Pfam Leucine rich repeat 129 190 IPR001611 GO:0005515
Gma08g00864 1136 Pfam Leucine rich repeat 301 360 IPR001611 GO:0005515
Gma08g00864 1136 Pfam Leucine rich repeat 204 262 IPR001611 GO:0005515
Gma08g00864 1136 SMART serkin_6 837 1125 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g00864 1136 SUPERFAMILY L domain-like 575 721 - -
Gma08g00864 1136 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 28 1125 - -
Gma08g00864 1136 ProSitePatterns Serine/Threonine protein kinases active-site signature. 961 973 IPR008271 GO:0004672|GO:0006468
Gma08g00864 1136 ProSiteProfiles Protein kinase domain profile. 837 1125 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g00864 1136 Gene3D Ribonuclease Inhibitor 151 725 IPR032675 -
Gma08g00864 1136 Gene3D - 550 606 - -
Gma08g00864 1136 Gene3D Phosphorylase Kinase; domain 1 797 912 - -
Gma08g00864 1136 SUPERFAMILY Protein kinase-like (PK-like) 818 1121 IPR011009 -
Gma08g00864 1136 MobiDBLite consensus disorder prediction 726 745 - -
Gma08g00864 1136 MobiDBLite consensus disorder prediction 725 745 - -
Gma08g00864 1136 ProSiteProfiles Leucine-rich repeat profile. 203 224 IPR001611 GO:0005515
Gma08g00864 1136 Pfam Protein tyrosine and serine/threonine kinase 841 1121 IPR001245 GO:0004672|GO:0006468
Gma08g00864 1136 SUPERFAMILY RNI-like 242 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00864 Gma-Chr8 7115355 7118899 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00864 12 1124 Receptor kinase-like Gene Family AT1G55610 48.398 0.0 1001
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Gma08g00864 PK_Tyr_Ser-Thr 1.5e-43 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00864 08 7115355 7118899 Gma08g00864 08 7115355 7118899 ECH
Gma05g01381 05 35475525 35478926 Gma08g00864 08 7115355 7118899 GST