Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00856 ATGGTTTTTCCAAAACCCGCTTCTGAGTCTGATCTCTTTCTTCATTCCAACTTTGCTTCTCGTTATGCCAGGGACTCTCTTCCCAGGTTCAGCATACCCGAGGACTCCATGCCAAAGGAGGCTGCGTATCAGAACATACACGATGAGTTGCAGCTTGATGCAATTCCAAAGCTGAACTTGGCTTCCTTTGTGACAACTTCCATGGAAGAAGAGTGCAACAAGCTCATCATGGAATCGATAAACAAGAACTATGTCGACATGGACGAATATCCTATCACCACTGACCTTCACAATCGGTGCGTGAACATGATAGCACGTTTATTCCATGCTGAAATTGGAGAAAATGAGATTGCAACTGGAGCAGGAACCGTTGGATCATCTGAGGCCATAATGCTGGCAGGGCTTGCATTCAAGAAGAAGTGGCAGAACAAGCGCAAGGAAGAGGGAAAGCCTTATGATAAGCCAAATTTGGTGACTGGTTCCAACGTGCAGGTATGTTGGGAGAAATTTGCGAGGTATTTTgaagtggagttgagagaagtggaggtgagggaagGCTACTATGTGATGGACCCTGCCAAAGCAGTTGAAATGGTTGATGAGAACACTATTTGTGTGGCTGCAATCTTGGGTTCAACTTACAATGGAGAGTTCGAAGATGTCAAGCTCCTAAATGACCTATTGCTAGAAAAAAACAAGCAAACTGGATGGGATACACCTATTCATGTGGATGCTGCAAGTGGTGGCTTTATTGCTCCATTCCTTTATCCAGAGTTAGAATGGGATTTTAGACTCCCATTGGTGAAGAGCATAAATGTTAGTGGCCACAAGTATGGGCTTGTTTATGCTGGCATTGGTTGGGTTATTTGGAGGACCAAGGATGACTTACCAGAAGACCTTGTCTTCCATATTAATTACCTTGGAGCTGACCAACCCACCTTCACCCTCAATTTCTCTAAAGGTTCTAGCCAGATCATTGCTCAATATTATCAGCTAATTCGTCTTGGCCAAGAGGGGTACCGAAGCATAATGGAGAACTGCAGAGAAAATGCAATGGTGCTGAAGGAAGATTTGGAGAAAAGTGGTCACTTTAACATTCTCTCAAAAGACGATGGTGTTCCTGTGGTGGCATTTTCTCTCAAAGACAGAAGCCGGTACGATGAGTTCAAGATATCAGAGATGTTGCGCCGCCACGGTTGGATCGTGCCGGCGTATCCAATGCCACCTGCTGCTCAACACATCAATGTGCTCCGTGTGGTCATCAGGGCTGAGTTTTCACGCACCCTTGCTGAACGCCTTGCGTTTGACATACACAATGTGATGGATGAACTTGAAAAGTTGCATCCCCCCATAGTGACCAAAAACACAAAGGAAGAGAACAAGGCCATGGTTGAAAATGGGGTGAAGAACACTGCATTGGATGCACACAGGGAAATCATTGCTCAAGAATCCAACAAGCGTCAGAAAATCATGGCAGCTTAG 1482 0.4413 MVFPKPASESDLFLHSNFASRYARDSLPRFSIPEDSMPKEAAYQNIHDELQLDAIPKLNLASFVTTSMEEECNKLIMESINKNYVDMDEYPITTDLHNRCVNMIARLFHAEIGENEIATGAGTVGSSEAIMLAGLAFKKKWQNKRKEEGKPYDKPNLVTGSNVQVCWEKFARYFEVELREVEVREGYYVMDPAKAVEMVDENTICVAAILGSTYNGEFEDVKLLNDLLLEKNKQTGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRTKDDLPEDLVFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGQEGYRSIMENCRENAMVLKEDLEKSGHFNILSKDDGVPVVAFSLKDRSRYDEFKISEMLRRHGWIVPAYPMPPAAQHINVLRVVIRAEFSRTLAERLAFDIHNVMDELEKLHPPIVTKNTKEENKAMVENGVKNTALDAHREIIAQESNKRQKIMAA 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00856 493 Gene3D - 1 65 - -
Gma08g00856 493 PANTHER GLUTAMATE DECARBOXYLASE 1 492 - -
Gma08g00856 493 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Gma08g00856 493 Gene3D - 361 447 - -
Gma08g00856 493 SUPERFAMILY PLP-dependent transferases 16 446 IPR015424 -
Gma08g00856 493 Gene3D - 66 360 IPR015421 GO:0003824
Gma08g00856 493 PANTHER GLUTAMATE DECARBOXYLASE 1 492 IPR010107 GO:0004351|GO:0006536|GO:0030170
Gma08g00856 493 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00856 Gma-Chr8 7009477 7011575 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00856 1 481 Calmodulin-binding Proteins AT5G17330 75.514 0.0 768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00856 08 7009477 7011575 Gma08g00856 08 7009477 7011575 ECH
Gma05g01373 05 35367617 35370215 Gma08g00856 08 7009477 7011575 GST