Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00828 ATGAGATTCTCAGCGGTGTGTTTTGTCATACTATTGCTGCTGGTGGTAGAACTAGAAGCAACCACATGTTTCACTTTCAACAAAGAGAAAAAGCTGTCAGAATTCAAGACCAAACTTCATCAAAAGATTCAAAAGTTAGCTACTCCTCCTTTATCAGCCTTGGCATCACCACCTGCTTCCTCTTCAGAAACAAACAAGAGTGGGAGGGTGTTGTACGTGAGTGAATATGGTGCAGACCCAACAGGGTCTGAAGAAAGCAGTGATGGCATTTTGAAAGCTGTTGAAGATGCTTTTGAGTTGCAGAAGGGTGTTGAGTTGGTTGGAGGAGTGAATGACCTTGGAGGAGTAGTGATTGATTTGGAAGGTGGAAACTACAAAATCAGCAAACCCATTGCATTCCCTTCATCTGGTGGTGGCAATGTTGTGGTGAAAGGAGGAACGTTGAGAGCATCTGATACATTTCCTGGTGATCGACATCTAATTGAGTTATGGTCATCAAACTCCGGGAAACTTGAGTCAAAAGAACCTCTGAATGCTGATGTCTTCAAAAGCATCAAAGCTCAAAACAATGCAATTTACTATGAAGACATAACGTTCCGGGACATCCTCTTCGATTCATCCTACAGAGGAGGAGGAATTTTCATTGTTGATTCCGCCAGAACCCGAATCAGCAATTGCTTCTTCCTTCATTTCACCACAGAAGGAATTCTAGTCCAACAAGGACACGAGACCTTTATATCAAGTTGCTTTCTTGGGCAACACTCAACCGTCGGTGGAGACAAAGCTGAGAAGGACTTCTCAGGGGTGGCCATTGATCTTGCTAGTAACGATAATGCAGTCACAGATGTTGCAATTTTCTCAGCAGCAATTGGTGTTGTGCTAAGGGGTCAAGCCAACATTCTAACTGGGGTGCATTGTTATAACAAGGCAACATATTTTGGTGGCATAGGCATATTAGTGAAATTGGCAGGCAATTCACTAACTAGAATTGATAACTGTTATCTGGATTATACTGGAATAGTCATGGAAGATCCTGTGCAAGTTCATGTCACAAATGGGTTGTTTCTAGGGGATGCTAATATTGTATTGAAGTCTATTAAAGGTCAAATTTTAGGCCTGAATATAGTTGATAATATGTTTAATGGTGACCCCAATAAGAAGGTTCCTATTGTAAATCTAGATGGGGCATTTAGTAGCATTGATCAAGTGGTGATTGATCACAACAATGTGAATGGCATGAGCTTGAGATCAACGGTTGGGAAGTTAACTGCGAGCGGAAATGGCACCAAGTGGGTGGCTGATTTTTCATCAGTTTTGGTGTTTCCTAATAGGATTAGCCATTTTCAATATTCATTTTATGCTCAAGATGAGCCTAAATTTGTAGCACTTTCTGTGACCAATGTGTCAGATAATGTCGTTGTTGTGGAGAGTGAGAAAGAAGCTAAAGGGTTCGTCTCCTTCATAGTTGAACAATAA 1476 0.4126 MRFSAVCFVILLLLVVELEATTCFTFNKEKKLSEFKTKLHQKIQKLATPPLSALASPPASSSETNKSGRVLYVSEYGADPTGSEESSDGILKAVEDAFELQKGVELVGGVNDLGGVVIDLEGGNYKISKPIAFPSSGGGNVVVKGGTLRASDTFPGDRHLIELWSSNSGKLESKEPLNADVFKSIKAQNNAIYYEDITFRDILFDSSYRGGGIFIVDSARTRISNCFFLHFTTEGILVQQGHETFISSCFLGQHSTVGGDKAEKDFSGVAIDLASNDNAVTDVAIFSAAIGVVLRGQANILTGVHCYNKATYFGGIGILVKLAGNSLTRIDNCYLDYTGIVMEDPVQVHVTNGLFLGDANIVLKSIKGQILGLNIVDNMFNGDPNKKVPIVNLDGAFSSIDQVVIDHNNVNGMSLRSTVGKLTASGNGTKWVADFSSVLVFPNRISHFQYSFYAQDEPKFVALSVTNVSDNVVVVESEKEAKGFVSFIVEQ 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00828 491 PANTHER POLYGALACTURONASE QRT3-LIKE PROTEIN 1 491 - -
Gma08g00828 491 PANTHER POLYGALACTURONASE QRT3 1 491 IPR039279 GO:0004650
Gma08g00828 491 Gene3D - 73 484 IPR012334 -
Gma08g00828 491 SUPERFAMILY Pectin lyase-like 69 413 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00828 Gma-Chr8 6815715 6820512 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00828 08 6815715 6820512 Gma08g00828 08 6815715 6820512 ECH