Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00812 ATGAGGGAACCATCGTCGGTGGGATTCGAAGGCAACGGCGTCGTTTCTTCGCCGCCGCAAGCTCTCATCGAGAGACTGAAAGACTACGGCCAAGAAGACGTTTTCGCCCTCTGGTACGAGCTCTCCCCCGAGGAACGCGAGTTTCTCGTCAAGGACATTGAGAGTTTAGATCTTTCGAGAATTGACCGGATTATTCGATGCTCGCTGCGATCTCAAGGACTGCCGGCGGCGGCCATTGAGCCGGTGCCGGAGAGCAATGTGTCGACGGTGGAGGAGAGAAGCCAGGAGGATCGAGAGAGATGGTTGAAAATGGGATTGAAAGCTATTTCAGATGGCAAATTAGCCGTGTTGCTTTTATCTGGTGGCCAGGGGACTCGACTTGGAAGTTCAGATCCAAAAGGATGTTTCAATATTGGACTTCCATCTGGAAAATCACTTTTTCAACTTCAAGCTGAGAGGATTTTGTGTGCACAGAGACTAGCTGCTCAAGCTACAAATGAGAATTCTTCTTCTTCAGTGCAAATACACTGGTACATCATGACTAGTCCATTCACTGATGAGGCAACACGCAAATTCTTTGAAAGTCATAAATTTTTTGGTCTTGAGGCAGAACAGGTTACCTTTTTCCAGCAAGGAACAATCCCTTGTGTTTCCAAGGATGGCAGATTTATTATGGAGACTCCATACAGGGTAGCAAAGGCTCCTGATGGGAATGGTGGAGTGTATTCAGCTCTGAAATCTACCAAATTATTGGAGGATATGGCCTCAAAAGGAATTAAGTATATTGATTGCTATGGAGTTGACAATGCACTGGTTCGAGTTGCTGATCCAACTTTTTTAGGTTACTTCATTGATAAAGGTGTTGCTGCTGCTGCAAAAGTTGTCCGTAAGGCGTATCCACAAGAAAAGGTTGGTGTGTTTGTAAGACGAGGTAAAGGTGGTCCTCTTACTGTAGTTGAATACAGTGAGTTGGACCAGTCACTAGCTTCTGCAGTCAATCAAGCAACTGGCCGTCTTCGTTTTTGTTGGAGTAATGTCTGCTTACACATGTTCACTCTGGATTTTCTGAACCAAGTGGCAAATGGCCTTGAAAAAGACAGCATTTATCATCTTGCAGAGAAGAAAATACCTTCCATACATGGATATACAATGGGATTAAAACTTGAACAGTTTATATTTGATGCATTTCCATATGCTCCTACGACTGCACTTTTTGAGGTGTTACGGGAGGAGGAATTTGCACCAGTGAAAAATGCAAATGGATCCAATGTTGACACTCCAGACAGTGCGAAACTACTTGTTCTTCGACTCCATACTCGTTGGGTAGTTGCTGCAGGTGGCTTCTTAACACATTCAGTGCCCTTATATGCAACAGGTGTTGAAGTGTCACCACTCTGTTCGTATGCTGGTGAAAACCTGGAACCAATATGTCGAGGAAGAACATTTCATGCACCTTCTCTTCTTCCATCATCACCTTCCTATGCACCACCAATAAGCTCCATACCTTCTAATTCTCTACTCTCTCTCACTTCTCTCTATCACATTTTTCTTACAAGATGGCAGCATCATCAGCATGCCTTATTTTCATTATTGAACAACAATAAGGCATCAAAAGCATTTTCCATAAAGGCATCTTTGGAGCAAAGGCAAGAAGAAGGGAGAAGGGGGTTTCTGAAACTGTTGCTTGGAAATCTGGGAGTTGGTTTGCCTGCACTATTGGGAAGTGGCAAAGCTTATGCTGATGAACAAGGGGTTTCATCCTCCAGAATGTCTTACTCCAGGTTTCTGGAGTATTTGGACAAGGACAGAGTTAAAAAAGTGGATCTTTATGACAATGGAAACACTGCTGTTGTTGAGGCTGTTTCGCCCGAGTTGGGGAACCGGTCACAGTATGTTAGAGTTCAACTCCCTGGACTTAACCAAGAGCTCCTTCAGAAATTCAGGGAAAAGAATATTGACTTTGCAGCTCATAGTCCCCAAGAAGAGTCAGGTTCTCTTTTAGCTAACCTGATTGGGAATCTGGCTTTCCCTTTGCTCTTGATTGGAGGATTGTTCCTTCTCTCGAGACGATCCGGAGGGATGGGAGGTCCTGGTGGCCCTGGATTTCCTCTTGCTTTTGGTCAATCCAAAGCCAAGTTTCAAATGGAACCAAACACCGGAGTGACATTTGATGATGTTGCTGGGGTGGATGAAGCCAAGCAGGACTTTATGGAGGTGGTGGAGTTTTTAAAGAAGCCTGAGAGGTTTACTGCTGTTGGGGCTCGCATTCCTAAAGGAGTTCTTCTTGTTGGTCCTCCAGGAACTGGGAAGACCTTGTTAGCCAAGGCTATTGCTGGTGAAGCTGGTGTTCCATTTTTCTCTATATCAGGTTCTGAGTTTGTTGAGATGTTTGTTGGTGTTGGTGCTTCTCGTGTTCGTGATTTGTTCAAGAAGGCGAAAGAGAATGCCCCTTGCATTGTCTTTGTTGATGAAATTGATGCTGTTGGAAGACAAAGAGGGACTGGAATTGGTGGAGGGAATGATGAAAGAGAGCAGACCCTCAACCAACTTTTGACAGAAATGGATGGGTTTGAGGGTAACACAGGTATCATTGTCGTTGCAGCAACTAACAGGGCTGACATTCTTGACTCGGCCTTGTTGAGACCTGGCCGATTTGATAGACAGGTGACAGTTGATGTTCCAGATATAAGGGGAAGGACTGAAATCCTAAAGGTTCATGCTAGCAACAAAAAGTTTGATGCTGATGTTTCTCTTGAAGTGATTGCAATGAGAACACCTGGCTTTAGTGGAGCTGATCTTGCGAATCTGTTGAATGAAGCTGCTATATTAGCTGGTCGCCGTGGAAAGACAGCTATTTCATCTAAAGAAATTGATGATTCTATTGATAGGATTGTGGCTGGAATGGAAGGAACAGTGATGACAGATGGGAAGAGCAAAAGTTTAGTGGCATATCATGAAGTTGGTCATGCTATTTGTGGAACTTTGACTCCTGGTCATGATGCTGTGCAAAAGGTAACACTAGTTCCTCGCGGTCAAGCTCGTGGACTTACATGGTTCATTCCTAACGATGACCCAACTCTGATCTCCAAACAACAACTCTTTGCAAGAATTGTTGGAGGACTAGGTGGGAGGGCTGCAGAAGAAATTATTTTCGGTGAGCCTGAAGTTACAACTGGAGCAGCTGGTGATTTGCAGCAAATCACCAGTTTGGCAAAACAGATGGTGACCACATTTGGAATGTCTGATATTGGTCCTTGGTCACTTATGGAACCATCAGCACAAGGTGGGGATGTCATCATGAGAATGATGGCAAGGAACTCAATGTCAGAGAGGCTTGCAGAAGACATTGATGCTGCCATCAAGAGGATCTCAGATGAAGCATATGAAATTGCACTGGAGCATATAAGGAACAACCGTGAGGCCATTGACAAGATTGTGGAAGTCCTTCTGGAGAAGGAGACTCTGAGCGGAGATGAATTCCGTGCTATATTGTCTGAGTTTGTTGAAATTCCAGCTGAAAACCGTGTTGCTCCTTCAACTCCAGTACCAGCCACTGTTTGA 3561 0.4462 MREPSSVGFEGNGVVSSPPQALIERLKDYGQEDVFALWYELSPEEREFLVKDIESLDLSRIDRIIRCSLRSQGLPAAAIEPVPESNVSTVEERSQEDRERWLKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCFNIGLPSGKSLFQLQAERILCAQRLAAQATNENSSSSVQIHWYIMTSPFTDEATRKFFESHKFFGLEAEQVTFFQQGTIPCVSKDGRFIMETPYRVAKAPDGNGGVYSALKSTKLLEDMASKGIKYIDCYGVDNALVRVADPTFLGYFIDKGVAAAAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDQSLASAVNQATGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSIYHLAEKKIPSIHGYTMGLKLEQFIFDAFPYAPTTALFEVLREEEFAPVKNANGSNVDTPDSAKLLVLRLHTRWVVAAGGFLTHSVPLYATGVEVSPLCSYAGENLEPICRGRTFHAPSLLPSSPSYAPPISSIPSNSLLSLTSLYHIFLTRWQHHQHALFSLLNNNKASKAFSIKASLEQRQEEGRRGFLKLLLGNLGVGLPALLGSGKAYADEQGVSSSRMSYSRFLEYLDKDRVKKVDLYDNGNTAVVEAVSPELGNRSQYVRVQLPGLNQELLQKFREKNIDFAAHSPQEESGSLLANLIGNLAFPLLLIGGLFLLSRRSGGMGGPGGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHASNKKFDADVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGKTAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGHAICGTLTPGHDAVQKVTLVPRGQARGLTWFIPNDDPTLISKQQLFARIVGGLGGRAAEEIIFGEPEVTTGAAGDLQQITSLAKQMVTTFGMSDIGPWSLMEPSAQGGDVIMRMMARNSMSERLAEDIDAAIKRISDEAYEIALEHIRNNREAIDKIVEVLLEKETLSGDEFRAILSEFVEIPAENRVAPSTPVPATV 1186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00812 1186 CDD AAA 735 892 - -
Gma08g00812 1186 Gene3D - 894 969 - -
Gma08g00812 1186 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 718 963 IPR027417 -
Gma08g00812 1186 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 15 485 IPR029044 -
Gma08g00812 1186 Hamap ATP-dependent zinc metalloprotease FtsH [ftsH]. 46 1175 IPR005936 GO:0004176|GO:0004222|GO:0016020
Gma08g00812 1186 ProSitePatterns AAA-protein family signature. 863 881 IPR003960 GO:0005524|GO:0016887
Gma08g00812 1186 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 2, CHLOROPLASTIC 498 1176 - -
Gma08g00812 1186 Pfam FtsH Extracellular 581 658 IPR011546 GO:0004176|GO:0004222|GO:0005524|GO:0008270|GO:0016021
Gma08g00812 1186 Pfam UTP--glucose-1-phosphate uridylyltransferase 63 447 IPR002618 GO:0070569
Gma08g00812 1186 Pfam ATPase family associated with various cellular activities (AAA) 760 891 IPR003959 GO:0005524|GO:0016887
Gma08g00812 1186 SUPERFAMILY FtsH protease domain-like 975 1171 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Gma08g00812 1186 SUPERFAMILY Nucleotide-diphospho-sugar transferases 21 490 IPR029044 -
Gma08g00812 1186 CDD UDPGlcNAc_PPase 99 420 - -
Gma08g00812 1186 SMART AAA_5 756 895 IPR003593 -
Gma08g00812 1186 Pfam Peptidase family M41 974 1163 IPR000642 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Gma08g00812 1186 Pfam AAA+ lid domain 915 958 IPR041569 -
Gma08g00812 1186 Gene3D - 711 893 IPR027417 -
Gma08g00812 1186 PANTHER METALLOPROTEASE M41 FTSH 498 1176 - -
Gma08g00812 1186 Gene3D - 585 664 - -
Gma08g00812 1186 Gene3D Peptidase M41 971 1169 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Gma08g00812 1186 TIGRFAM FtsH_fam: ATP-dependent metallopeptidase HflB 671 1164 IPR005936 GO:0004176|GO:0004222|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00812 Gma-Chr8 6683505 6697696 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00812 08 6683505 6697696 Gma08g00812 08 6683505 6697696 ECH
Gma05g01334 05 35016760 35031479 Gma08g00812 08 6683505 6697696 GST