Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02222 ATGTCAGAGGTTAAGGACCCTGCGATAAAGCTTTTTGGAAGGACAATTTCGCTGACACACACACACATCAATGATTCTTCTTCTTCTTCTGCACCTGCTCGTGCCCCTTCATCTTCCTCTTCTCCTCGTGAAGTTACCTCTTCTGCAACACAACAACAACATGAACCTGAGGAACCATCAAGGAAAGAACTTACCTCATCACAAGATGATGATGGCTCACATCAAACCACAGAGGATTTAAAATCCCCCACGACATCTTCAGGCATATTTGAGAATCCTAAGACTCCCTCACCAGAAACTGAGACATCAGTCCCGAAATCCTCCACAAATGGAGAACAAAGCGAGACAAGTGCTTCTGATGAAAAAACACCAAAGAAACCCGACAAGGTGCTTCCATGCCCACGATGCAACAGCATGGACACCAAGTTCTGTTACTACAACAACTACAATGTCAACCAGCCTCGTCATTTCTGCAAGAACTGCCAAAGATACTGGACTGCTGGAGGTACAATGAGGAATGTGCCGGTAGGAGCCGGTCGTCGAAAGAACAAAAATTTCCCGGCGACCGCATCACATTACCGGCACTTAATGTTCCCAGAGGGGCTTCAAGGAGCCACACTCAATGCCCCCAATGGATTGCATAATGCTGTGTTGGGAAATGGAGCAGCTGTTTTGACCTTTGGTCCTGATTCTCCCCTTTGTGATACAATGGCATCAATGTTGAACATTGCAGAGCGAGCACAAAGTTGTGTTCCAAATGGGTTTCAAGCAACTGAGCCGAATAGTTTTGTTTCCTATAGAAAGGAGGAGGATGGAAGTACTAGTGGTCACTCTACTGGAGTTTCTGTTGCAACAACTTCAACTTCAAGCCATAGTGGCTCACATGAATCAGTTGATAAAAGGGTTGAAGGTTTCACTCCTCAATTGCCATATTTCCCAAGTGGCCCTTGGCCTTATCCTATGCCTCCTCCTACATTTTGCCCACCAGGGTACCCTTTATCATTCTATACTACACCAGCATATTGGGGGAAACACTCAAGGGATGGAAACATCATTGCCCCATCCAATTCACAAAGAGAAATGCATGATATGGAGCACAAGAGCTCAGAACACAATGTCTTGATCCCCAAGACTCTTAGAATTGATGACCCTAGTGAAGCTGCAAAGAGTTCCATTTCCATGTGGTCAAAACTAGGGATCAAGGATGATAAGGCCGGTTCCGGAGGCCTTTTCAAGGCTTTTCCATCATCCAAGGGAAACGACATGAATCATCACATGGTTGAAGCATCACCGCTGTTGCAAGCCAACCCTGCGGCTCTATCGCGGGATGGCAACGGGAAGGACGGATTTCCCTATTCCCATTCCCGTTGTTACAAAAAGgagcggatcgtttga 1395 0.4573 MSEVKDPAIKLFGRTISLTHTHINDSSSSSAPARAPSSSSSPREVTSSATQQQHEPEEPSRKELTSSQDDDGSHQTTEDLKSPTTSSGIFENPKTPSPETETSVPKSSTNGEQSETSASDEKTPKKPDKVLPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNFPATASHYRHLMFPEGLQGATLNAPNGLHNAVLGNGAAVLTFGPDSPLCDTMASMLNIAERAQSCVPNGFQATEPNSFVSYRKEEDGSTSGHSTGVSVATTSTSSHSGSHESVDKRVEGFTPQLPYFPSGPWPYPMPPPTFCPPGYPLSFYTTPAYWGKHSRDGNIIAPSNSQREMHDMEHKSSEHNVLIPKTLRIDDPSEAAKSSISMWSKLGIKDDKAGSGGLFKAFPSSKGNDMNHHMVEASPLLQANPAALSRDGNGKDGFPYSHSRCYKKERIV 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02222 464 PANTHER CYCLIC DOF FACTOR 2 343 443 IPR045174 GO:0003700|GO:0006355
Gma07g02222 464 PANTHER CYCLIC DOF FACTOR 2 1 343 IPR045174 GO:0003700|GO:0006355
Gma07g02222 464 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN 343 443 - -
Gma07g02222 464 MobiDBLite consensus disorder prediction 20 132 - -
Gma07g02222 464 Pfam Dof domain, zinc finger 128 185 IPR003851 GO:0003677|GO:0006355
Gma07g02222 464 ProSiteProfiles Zinc finger Dof-type profile. 131 185 IPR003851 GO:0003677|GO:0006355
Gma07g02222 464 MobiDBLite consensus disorder prediction 20 54 - -
Gma07g02222 464 MobiDBLite consensus disorder prediction 78 117 - -
Gma07g02222 464 ProSitePatterns Zinc finger Dof-type signature. 133 169 IPR003851 GO:0003677|GO:0006355
Gma07g02222 464 MobiDBLite consensus disorder prediction 275 293 - -
Gma07g02222 464 MobiDBLite consensus disorder prediction 267 297 - -
Gma07g02222 464 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN 1 343 - -
Gma07g02222 464 MobiDBLite consensus disorder prediction 55 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02222 Gma-Chr7 44815552 44821298 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g02222 4 445 C2C2-Dof Transcription Factor Family AT5G39660 39.960 3.16e-82 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gma07g02222 zf-Dof 3.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02222 - - gmx:100813315 799.66