Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00112 ATGCAAGACCCAACAGCATTCCAAGGAGTGAAGCCACCCCAGTTTCCTGAACAAGAACAACTCAAGTGTCCACGTTGTGACTCCAACAACACCAAATTCTGCTACTATAACAACTACAACCTCTCGCAGCCACGCCACTTTTGCAAGAACTGCAGAAGGTACTGGACTAAAGGTGGCGCTTTGAGAAACATCCCTGTTGGGGGTGGAAGCAGAAAGACCACAAAACGTTCTTCATCAACCTTATCAAAACGCTCTTCTGCACCATCTTCTTCCTCTGCAGTTTCGGATCCTGACCCGACCCGGATTTGCACCAACCCGGTTGATCAAGACCAAAGGGTGCTCAACATTGGTGGTGGCAGTTTCAGTTCCCTTCTAGCTTCATCTGGGCACTTCGGAACCCTCTTGGAGGGTCTGAATCCATCTGGGTCGGGTCTCAAAATGGGTGAATTTGTGGAGGGCGTGAGTTCTGACCCGGGTCTGAATCTGGATTCGGGTCTAAACCCGGATTTGCAGGTTCAGAGCAATGAGAATTCAGAGAGTTTTCTAGGTTTGCAGAATGGTGATTCAAGCTGTTGGAATGGTACTCATGGTTGGTCTGATCTTGCAATATACACACCTGGCCCAAGTTTTCAATAG 636 0.4858 MQDPTAFQGVKPPQFPEQEQLKCPRCDSNNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSRKTTKRSSSTLSKRSSAPSSSSAVSDPDPTRICTNPVDQDQRVLNIGGGSFSSLLASSGHFGTLLEGLNPSGSGLKMGEFVEGVSSDPGLNLDSGLNPDLQVQSNENSESFLGLQNGDSSCWNGTHGWSDLAIYTPGPSFQ 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00112 211 Pfam Dof domain, zinc finger 19 75 IPR003851 GO:0003677|GO:0006355
Gma07g00112 211 ProSitePatterns Zinc finger Dof-type signature. 23 59 IPR003851 GO:0003677|GO:0006355
Gma07g00112 211 MobiDBLite consensus disorder prediction 70 101 - -
Gma07g00112 211 MobiDBLite consensus disorder prediction 1 20 - -
Gma07g00112 211 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 3 211 IPR045174 GO:0003700|GO:0006355
Gma07g00112 211 ProSiteProfiles Zinc finger Dof-type profile. 21 75 IPR003851 GO:0003677|GO:0006355
Gma07g00112 211 MobiDBLite consensus disorder prediction 62 101 - -
Gma07g00112 211 PANTHER DOF ZINC FINGER PROTEIN DOF3.1-LIKE 3 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00112 Gma-Chr7 960692 962401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00112 13 135 C2C2-Dof Transcription Factor Family AT1G51700 57.463 1.14e-45 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gma07g00112 zf-Dof 6.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00112 - - gmx:100790822 390.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00112 07 960692 962401 Gma07g00112 07 960692 962401 ECH
Gma07g00112 07 960692 962401 Gma08g01802 08 16070491 16072341 GST
Gma13g03153 13 45667487 45669492 Gma07g00112 07 960692 962401 PCT
Gma07g00112 07 960692 962401 Gma13g03153 13 45667487 45669492 PCT