Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02792 ATGTCACCTCCACCATTTTCCCCCCCTCTCTCTATTTCCCTTCTCTTTGTCTTCCTGTTAGCACCATTACTCTTAGCTCAATCTCCACcttctccttctccttcttcttcttcttcttcttctGTTGCCTGCAAAGGCACACTATATCCAAAACTCTGCCGTTCCATTCTCTCAGCCATTCGTTCATCCCCTTCAGACCCTTATGGCTATGGCAAGTTCTCCATAAAACAAAGCCTCAAACAGGCAAGAAAACTAGCCAAAGTCTTTGAGGACTTTCTCCAACGCCACCAAAAATCACCTTCCCTCAACCATGCTGAGACTGCATCACTTGGTGACTGCAGAGACCTAAACCAGCTCAATGTGGACTACTTGGCGTCCATATCCGAGGAGCTCAAATCCGCAAGCTCCTCAGACTCCGAACTCATCGAGAAAATCGAGAGCTACCTCAGTGCCGTGGCCACCAACCACTACACTTGCTATGATGGGTTGGTTGTGACCAAAAGCAACATTGCCAATGCACTTGCCGTGCCACTCAAGGATGTGACACAGTTGTATAGTGTGTCACTTGGGTTGGTCACTGAGGCTCTTGACAAAAACCTAAGGAGGAATAAGACCCGCAAGCATGGTCTCCCCACCAAGACCTTCAAGGTTAGGCAACCACTAGAGAAGCTCATCAAGCTTCTTCGCACAAAGTATAGTTGCGCCAAATTATCCAATTGTACTAGTAGAACTGAAAGGATTCTTAAAGAAAGTGGAAGTCAAGGAATTTTATTGTACGACTTTGTGATTGTGAGCCATTATGGAATAGACAACTACACTTCCATTGGAGATGCTATTGCTGCTGCACCCAATAATACAAAGCCTGAAGATGGATATTTCCTTGTGTATGTTAGGGAGGGACTCTATGAGGAATATGTAGTTATTCCCAAAGAAAAGAAGAATATATTGCTAGTTGGAGATGGTATTAACAAGACTATCATCACAGGGAACCATAGTGTCATAGATGGTTGGACTACTTTCAATTCTTCCACCTTTGCTGTTTCTGGAGAAAGATTTATAGCAGTGGATGTTACATTCAGAAACACAGCTGGACCCGAAAAGCACCAAGCAGTGGCAGTGAGGAACAATGCTGATCTCTCCACATTCTACCGTTGCAGTTTTGAAGGATATCAAGACACACTCTATGTTCACTCCTTGAGGCAATTCTATAGGGAATGTGAAATCTATGGAACTGTGGACTTCATTTTCGGCAATGCAGCTGTGGTCTTCCAGGGTTGCAAAATCTATGCCAGAAAACCATTGCCAAACCAGAAGAATGCTGTCACAGCACAAGGAAGAACTGATCCAAATCAAAACACTGGCATTTCGATCCAAAACTGCAGCATTGATGCTGCACCGGACTTGGTCGCGGACTTGAATTCCACGATGAGTTTCTTAGGCCGTCCATGGAAGGTGTATTCGAGGACTGTCTATCTGCAGTCATACATTGGAAATGTAATTCAACCTGCTGGGTGGCTAGAGTGGAATGGAACAGTTGGATTAGACACTCTCTTTTATGGTGAATTCAACAACTATGGACCTGGTTCTAACACTAGCAATAGAGTAACATGGCCTGGTTACTCTCTGTTGAATGCTACTCAAGCTTGGAACTTCACAGTCCTTAATTTTACATTGGGAAATACTTGGCTTCCTGACACAGATATACCTTACACTGAAGGACTACTAAGATAG 1731 0.4327 MSPPPFSPPLSISLLFVFLLAPLLLAQSPPSPSPSSSSSSSVACKGTLYPKLCRSILSAIRSSPSDPYGYGKFSIKQSLKQARKLAKVFEDFLQRHQKSPSLNHAETASLGDCRDLNQLNVDYLASISEELKSASSSDSELIEKIESYLSAVATNHYTCYDGLVVTKSNIANALAVPLKDVTQLYSVSLGLVTEALDKNLRRNKTRKHGLPTKTFKVRQPLEKLIKLLRTKYSCAKLSNCTSRTERILKESGSQGILLYDFVIVSHYGIDNYTSIGDAIAAAPNNTKPEDGYFLVYVREGLYEEYVVIPKEKKNILLVGDGINKTIITGNHSVIDGWTTFNSSTFAVSGERFIAVDVTFRNTAGPEKHQAVAVRNNADLSTFYRCSFEGYQDTLYVHSLRQFYRECEIYGTVDFIFGNAAVVFQGCKIYARKPLPNQKNAVTAQGRTDPNQNTGISIQNCSIDAAPDLVADLNSTMSFLGRPWKVYSRTVYLQSYIGNVIQPAGWLEWNGTVGLDTLFYGEFNNYGPGSNTSNRVTWPGYSLLNATQAWNFTVLNFTLGNTWLPDTDIPYTEGLLR 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02792 576 PANTHER PECTINESTERASE 12 574 - -
Gma06g02792 576 CDD PMEI-like_3 43 194 - -
Gma06g02792 576 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 193 IPR035513 -
Gma06g02792 576 ProSitePatterns Pectinesterase signature 2. 408 417 IPR033131 -
Gma06g02792 576 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 194 IPR035513 -
Gma06g02792 576 Pfam Pectinesterase 262 559 IPR000070 GO:0030599|GO:0042545
Gma06g02792 576 Gene3D - 260 576 IPR012334 -
Gma06g02792 576 PANTHER PECTINESTERASE 12 574 - -
Gma06g02792 576 Pfam Plant invertase/pectin methylesterase inhibitor 43 190 IPR006501 GO:0004857
Gma06g02792 576 SMART PMEI_2 35 191 IPR006501 GO:0004857
Gma06g02792 576 TIGRFAM PME_inhib: pectinesterase inhibitor domain 12 193 IPR006501 GO:0004857
Gma06g02792 576 SUPERFAMILY Pectin lyase-like 262 573 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02792 Gma-Chr6 51767733 51773098 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02792 3 575 Carbohydrate Esterase AT3G10720 60.172 0.0 709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02792 06 51767733 51773098 Gma13g01649 13 31317332 31322653 PCT
Gma13g01649 13 31317332 31322653 Gma06g02792 06 51767733 51773098 PCT