Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02791 ATGTCTTCCTTAAAATCCTACGGGAAAGTTGATGAGCATGAGCAAATGGTGCTGGAGGCAAGGAGGAAAACCAGAAAGAGAATCACAATCATAGGCCTCTCCTCAATAGTCCTAGCAGGTGTTATATTTGCTGCTATATTTGGCATTGTAAGCACCACTCATGACAACTCACAAGATGCCAATGATGCTCACACTGTGACAAGTTCACTGAGGGCTGTTTGTGATGTGACCTTGTACAAGGACTCATGCTATAGCAGCCTTGGTTCTGTTGTGGACTCAAGGCAGGTTCAGCCTGAGGAGCTGTTCATCTTGTCAATGAAGTTGGCCTTATCTGAAGTGTCCAAAGCTGTTGAGTATTTCAGTGATCATCATCTTGATGGGGTTTTCAAAGGGTTGAAGTTGATGGATGGAAGGACTAAGGAGGGTTTGAAAAATTGCAAGGAGCTTTTGGGTCTTGCGGTTGACCATCTGAATAGCTCTTTGACATCAGGGGAAAAGTCTTCAGTTCTTGATGTTTTTGAGGATCTTAAAACATGGTTAAGTGCTGCAGGTACATATCAGCAGACTTGCATTGAAGGCTTTGAAGATGCAAAAGAAGCAATTAAGTCTAGTGTAGTAAGCTATCTTAGAAATTCTACACAGTTCACTAGTAACAGTCTTGCCATCATAACCTGGATCAGCAAGGCTGCAACCACGCTGAACTTGAGGCGCTTACTGAGTTTACCTCATCAGAATGAGGCACCAGAATGGCTTCATTCAAAAGATAGGAAGCTGCTTCTAACAGAGGATTTGAGGGAAAAAGCTCACATTGTTGTGGCCAAAGATGGCAGTGGGAAATATAAAAAAATTTCTGATGCACTTAAACATGTCCCTAATAATAGTAACAAGAGGACTGTGATCTATGTGAAGAGAGGGGTTTACTATGAAAATGTGAGGGTAGAGAAGACCAAATGGAATGTGATGATCATTGGTGATGGTATGACTTCTACTATTGTATCTGGCAGCCGTAACTTTGTGGATGGAACACCAACATTTTCAACAGCAACATTTGCTGTATTTGGAAGGAATTTCATAGCTAGAGATATGGGTTTTCGCAACACAGCTGGTCCACAGAAGCATCAAGCAGTGGCACTAATGACTAGTGCAGATCAAGCAGTTTACTATAGATGTCACATTGATGCATATCAGGACACTCTCTATGCTCATTCCAACCGCCAATTTTACAGAGAATGCAACATCTATGGCACTGTTGATTTCATTTTCGGCAATTCTGCGGTTGTGATCCAAAACTGCAACATTAGGCCAAAGCTACCTATGCATGGCCAGCAGAACACAATCACAGCTCAGGGAAAAACTGACCCTAACATGAACACTGGAATCTCCATTCAACATTGCAACATTTCACCCTTTGGAAACTTGAGTTCTGTCCAGACATACCTTGGAAGACCCTGGAAGAACTACTCAACCACAGTGTACATGAGATCAAGGATGGATGGCTTTGTGAGCCCCAAAGGCTGGTTGCCGTGGACCGGGAACTCAGCACCAGACACCATTTTCTATGCTGAATTTCAGAATGTTGGACCAGGTGCTTCAACAAAGAATAGGGTGAAGTGGAAGGGTTTGAGAACCATTACTAGTAAACAAGCCAGCAAGTTTACTATTAAGGCTTTTCTACAAGGAGATAAATGGATTTCTGCATCAGGTGCTCCATTTAAGTCTGATCTATGA 1728 0.4253 MSSLKSYGKVDEHEQMVLEARRKTRKRITIIGLSSIVLAGVIFAAIFGIVSTTHDNSQDANDAHTVTSSLRAVCDVTLYKDSCYSSLGSVVDSRQVQPEELFILSMKLALSEVSKAVEYFSDHHLDGVFKGLKLMDGRTKEGLKNCKELLGLAVDHLNSSLTSGEKSSVLDVFEDLKTWLSAAGTYQQTCIEGFEDAKEAIKSSVVSYLRNSTQFTSNSLAIITWISKAATTLNLRRLLSLPHQNEAPEWLHSKDRKLLLTEDLREKAHIVVAKDGSGKYKKISDALKHVPNNSNKRTVIYVKRGVYYENVRVEKTKWNVMIIGDGMTSTIVSGSRNFVDGTPTFSTATFAVFGRNFIARDMGFRNTAGPQKHQAVALMTSADQAVYYRCHIDAYQDTLYAHSNRQFYRECNIYGTVDFIFGNSAVVIQNCNIRPKLPMHGQQNTITAQGKTDPNMNTGISIQHCNISPFGNLSSVQTYLGRPWKNYSTTVYMRSRMDGFVSPKGWLPWTGNSAPDTIFYAEFQNVGPGASTKNRVKWKGLRTITSKQASKFTIKAFLQGDKWISASGAPFKSDL 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02791 575 Gene3D Invertase/pectin methylesterase inhibitor family protein 67 228 IPR035513 -
Gma06g02791 575 Pfam Pectinesterase 269 561 IPR000070 GO:0030599|GO:0042545
Gma06g02791 575 SMART PMEI_2 65 222 IPR006501 GO:0004857
Gma06g02791 575 ProSitePatterns Pectinesterase signature 2. 413 422 IPR033131 -
Gma06g02791 575 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 70 227 IPR035513 -
Gma06g02791 575 SUPERFAMILY Pectin lyase-like 267 572 IPR011050 -
Gma06g02791 575 TIGRFAM PME_inhib: pectinesterase inhibitor domain 47 226 IPR006501 GO:0004857
Gma06g02791 575 Gene3D - 265 575 IPR012334 -
Gma06g02791 575 PANTHER PECTINESTERASE 5 573 - -
Gma06g02791 575 CDD PMEI-like_3 72 228 - -
Gma06g02791 575 Pfam Plant invertase/pectin methylesterase inhibitor 69 222 IPR006501 GO:0004857
Gma06g02791 575 PANTHER PECTINESTERASE 5 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02791 Gma-Chr6 51764356 51767471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02791 7 575 Carbohydrate Esterase AT3G10710 55.846 0.0 671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02791 06 51764356 51767471 Gma13g01650 13 31323731 31327709 PCT
Gma06g02791 06 51764356 51767471 Gma15g02149 15 43538759 43541977 PCT
Gma13g01650 13 31323731 31327709 Gma06g02791 06 51764356 51767471 PCT
Gma15g02149 15 43538759 43541977 Gma06g02791 06 51764356 51767471 PCT