Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02061 ATGATGATGGTGCGGTTCGTCTATGCTCTTATCTTTGGGTTTGTGGCTTTGAATTGCTTGCAAGTGTTTGAAGAATCCAATGCTCAACGCTTACCGCAAGATGAAGTGAAAGCACTGCAAGCAATATCGGATAAACTAGAGAACGTGAATTGGAATGTCACAGAACGTTCCTGCATAGAGGTTGGAGGCTTCAATGGCACAATTAATAAAAACAACGGTGACATCGTAAGGAATGTCACATGCAATTGCACTTTCCAAAATAACTCAGTTTGCCATGTTGATAAGATCATTCTCAAGGATCAAAATATATCAGGAGTTCTCCCCAGTGAATTTGGAAATCTCACACACCTGAAAGAACTTGATCTCACTCGCAACTATCTCAATGGCTCACTTCCAACAAATTTTCCTCCCAACTCTCTGGTCATTTTGTCCCTTCTGGGAAACCGACTAAGTGGTCCAATTCCCACAGAAATTGGTGATATTGCTAGTTTGGAGGAACTGGTCTTAGAATGTAATCAACTTAAAGGACTATTTCCTCCTAGTCTTGGAAATTTGAGCAAGTTGAAGAGACTGCTTCTTTCTGCAAATAATTTTACAGGGACCATACCAGAAACATATAGCAAACTAAAGAATCTCACTGAGTTTAGGATAGATGGAAGCAGTTTATCCGGACCAATACCCAGTTTCATTGGAAACTGGACCAATCTTGAAAGACTGGATTTGCAGGGAACAAATATGGAAGGCCCAATTCCACCCACTATATCTCAGTTGAAACTTTTGACTGAGTTGAGAATAACTGATTTGAATGGTGGACCAAGTATGACATTTCCTGATCTGAAGAATTTGAAAAAATTGAAACGACTGGTATTGAGAAATTGCTTAATCACGGGTTCTATTCCCGATTACATCGGAGAAATGGCAAACTTGACTACTTTAGACCTAAGCTTCAACATGTTGACTGGTCCAGTCCCAGATCCAATACAGGGATTGGATAACCTAGACTACTTGTTTCTGACAAATAATTCTCTGAGTGGACCAATTCAGGAATGGATACTGAGCTTCAAGAAGCATATAGATCTATCTTACAACAATTTTACAAGTTCTTCTGCCACTACCTGTCAGCCCTTGGATGTGAACTTGGCTTCAAGCCATTCTTCTTCAGCAGTAACTTCGGCCTCAACATTTTGTTTGAAGAGGAACCTTCCTTGTGCAGAAAAACCCCAATATAAGTCATTGTTCATAAACTGTGGAGGAAAAGAGGGGGAGTTTGAAGGCAATGACTACGTAGGTGACCTCGAGCTAGATGGAATTTCAAACTTTGATCTTAGAAATGAAGGACAATGGGCTTATAGCAGCACAGGAGTATATATGGGAAAGGCTGATGCTGGTTTTATAGCAACAAATACATTTTCTTTGAATATTACTGGTCCAGATTACTACCAAAATGCCCGCCTTTCCCCTCTGTCGCTTAACTACTATGGCCTTTGTCTGCCAAAGGGCAATTATAAAGTGAAGCTCCATTTTGCTGAGATTATGTTTTCTAATGACCAGACTTTTAGAAGTCTAGGAAGGCGCATATTTGACGTTTCAGTTCAAGGTTTTAGATATTTGAAAGATTTTAATATTATGGAAGAAGCTGGTGGAGTTGGAAAGAATATCACTAAGGAATTTGATGTTGATGTTGATGATGGAACCTTGGAAATCCACTTATACTGGGCAGGAAAAGGAACTACTGCCATTCCTGATAGAGGTGTATATGGACCTCTTATATCTGCTATTGAGATGATACCAAGTAAGTGTTATTATTATTTTTTCTTTCAACTACCATGTTATTTCATGTTCTATAAGCATTTCTTCTTTGTTCTAGACTTTGAGAATCCTTCAAAAGGGATGTCTACTGGATTCATTGTTGGAATTGTTGCTGCATCTTGTGGGCTTGTCATATTGATACTGATTCTCCTCTGGAAGATGGGTTTCATTTGTAAGAAAGATACAACAGATAAAGAACTTCTAGAATTGAAAACGGGTTATTTCAGCTTAAGACAAATTAAAGCAGCTACTAATAACTTTGACCCTGCAAATAAGATAGGTGAAGGAGGATTTGGGCCTGTATACAAGGGTGTGTTGTCAGATGGTGATGTGATTGCTGTTAAGCAGCTCTCCTCAAAATCAAAGCAAGGGAACCGTGAATTTGTCAATGAAATTGGAATGATATCTGCTTTGCAGCATCCAAATCTGGTGAAGCTTTATGGCTGTTGCATTGAAGGAAACCAGTTGCTACTTATATATGAATACATGGAGAACAACAGTCTTGCTCGTGCACTTTTCGGTGAACATGAACAGAAGCTGCACTTGTATTGGCCCACAAGAATGAAGATCTGTGTGGGGATAGCAAGGGGATTGGCTTATCTTCATGAGGAGTCAAGGTTGAAAATAGTACACAGGGACATTAAGGCAACCAATGTCTTACTTGACAAGGATCTGAATGCCAAGATCTCTGACTTTGGCTTAGCTAAGCTTGATGAAGAAGAGAATACTCATATCAGTACACGTATAGCCGGAACAATTGGTTACATGGCTCCAGAATATGCTATGCGGGGTTATTTGACTGATAAAGCAGATGTATATAGCTTTGGAGTTGTAGCTTTAGAGATTGTGAGTGGAAAAAGCAACACAAAATACAGGCCAAAGGAGGAGTTTGTATATCTTCTAGATTGGGCATATGTTCTCCAAGAGCAAGGAAACCTTCTGGAATTGGTGGATCCAAGTCTTGGTTCAAAATACTCCCCAGAGGAGGCCATGAGAATGCTGAGTTTGGCACTCTTATGCACCAATCCATCTCCCACTCTTAGACCAACCATGTCATCTGTAGTGAGCATGCTTGAAGGAAAAATTCCAATCCAAGCGCCGATAATCAGGCGCAGTGAGAGCAACCAAGATGTAAGATTTAAAGCCTTTGAATTGCTATCACAAGACAGCCAAACTCTTGTTTCTTCCGCATACTCACAAGAAAGTATGAAGCAAAGACACAAATCAGAAGATGGACCGTGGGTTGACTCCTCCATATCTCTTCCAAGTGGTGATGATTATTCTTCAAGCAGTAAACTTATTTAA 3114 0.3982 MMMVRFVYALIFGFVALNCLQVFEESNAQRLPQDEVKALQAISDKLENVNWNVTERSCIEVGGFNGTINKNNGDIVRNVTCNCTFQNNSVCHVDKIILKDQNISGVLPSEFGNLTHLKELDLTRNYLNGSLPTNFPPNSLVILSLLGNRLSGPIPTEIGDIASLEELVLECNQLKGLFPPSLGNLSKLKRLLLSANNFTGTIPETYSKLKNLTEFRIDGSSLSGPIPSFIGNWTNLERLDLQGTNMEGPIPPTISQLKLLTELRITDLNGGPSMTFPDLKNLKKLKRLVLRNCLITGSIPDYIGEMANLTTLDLSFNMLTGPVPDPIQGLDNLDYLFLTNNSLSGPIQEWILSFKKHIDLSYNNFTSSSATTCQPLDVNLASSHSSSAVTSASTFCLKRNLPCAEKPQYKSLFINCGGKEGEFEGNDYVGDLELDGISNFDLRNEGQWAYSSTGVYMGKADAGFIATNTFSLNITGPDYYQNARLSPLSLNYYGLCLPKGNYKVKLHFAEIMFSNDQTFRSLGRRIFDVSVQGFRYLKDFNIMEEAGGVGKNITKEFDVDVDDGTLEIHLYWAGKGTTAIPDRGVYGPLISAIEMIPSKCYYYFFFQLPCYFMFYKHFFFVLDFENPSKGMSTGFIVGIVAASCGLVILILILLWKMGFICKKDTTDKELLELKTGYFSLRQIKAATNNFDPANKIGEGGFGPVYKGVLSDGDVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYMENNSLARALFGEHEQKLHLYWPTRMKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTKYRPKEEFVYLLDWAYVLQEQGNLLELVDPSLGSKYSPEEAMRMLSLALLCTNPSPTLRPTMSSVVSMLEGKIPIQAPIIRRSESNQDVRFKAFELLSQDSQTLVSSAYSQESMKQRHKSEDGPWVDSSISLPSGDDYSSSSKLI 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02061 1037 PANTHER - 71 1022 - -
Gma06g02061 1037 SUPERFAMILY Galactose-binding domain-like 446 577 IPR008979 -
Gma06g02061 1037 SUPERFAMILY Protein kinase-like (PK-like) 672 962 IPR011009 -
Gma06g02061 1037 CDD STKc_IRAK 696 963 - -
Gma06g02061 1037 Pfam Malectin domain 411 593 IPR021720 -
Gma06g02061 1037 Gene3D Ribonuclease Inhibitor 269 396 IPR032675 -
Gma06g02061 1037 ProSitePatterns Serine/Threonine protein kinases active-site signature. 812 824 IPR008271 GO:0004672|GO:0006468
Gma06g02061 1037 ProSiteProfiles Protein kinase domain profile. 690 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02061 1037 SMART serkin_6 690 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02061 1037 Pfam Protein tyrosine and serine/threonine kinase 694 960 IPR001245 GO:0004672|GO:0006468
Gma06g02061 1037 MobiDBLite consensus disorder prediction 999 1037 - -
Gma06g02061 1037 Gene3D Ribonuclease Inhibitor 204 268 IPR032675 -
Gma06g02061 1037 Pfam Leucine rich repeat 163 220 IPR001611 GO:0005515
Gma06g02061 1037 Pfam Leucine rich repeat 284 343 IPR001611 GO:0005515
Gma06g02061 1037 Gene3D Phosphorylase Kinase; domain 1 656 765 - -
Gma06g02061 1037 Gene3D - 411 599 - -
Gma06g02061 1037 Gene3D Ribonuclease Inhibitor 35 203 IPR032675 -
Gma06g02061 1037 Gene3D Transferase(Phosphotransferase) domain 1 766 979 - -
Gma06g02061 1037 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 71 1022 - -
Gma06g02061 1037 SUPERFAMILY L domain-like 81 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02061 Gma-Chr6 33045859 33060602 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02061 19 1028 Receptor kinase-like Gene Family AT1G53440 59.608 0.0 1189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma06g02061 PK_Tyr_Ser-Thr 9.8e-50 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02061 06 33045859 33060602 Gma06g02061 06 33045859 33060602 ECH