Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01174 ATGGCCTTGTCAAGTCCACACATACAAAGATTCCTCTTATGCAAGCTTCATAGCCGCTCCACCGCCAAGAACAGACACAGAAACAGCTTCACCGCCACAACCACCACCAGGAGCAGTTGCTGCTCTGCCATAGCCATTGATGCTCCGTCGTCTTTGACCGAAGTGCCCGGCATAAGATGGGGGTCCATAGCCTTGCAGGGTCTCCGTGAAGAGATGGAGGATGATATTATTGTTCGACCTGAGGGCCTTCAGGGCTTCACTTTTGCAGCTGTGTTTGATGGCCATGGAGGGTTTTCTTCTGTCGAGTTCCTCAGTGCCAACTACAGGGATGAGCTGTACAAGGAGTGTGTTGAAGCTTTACAAGGTGGGTTACTATTAGTCGAGAAAGATTTCAAAGCCATTAAAAGGGCATTACAGGAGGCATTTCTCAAGGCTGACGCGAGGTTATTAAAACGGCTTGAAATGAATGGAGAGGAGGATGAATCAGGTGCTACATCAACTGCCGTGTTCATTGGAGATGATGAGCTGCTAATTTCACATATTGGTGACTCATCAGCGGTTCTATGTAGATCTGGAAAAGCAGAAGTTCTGACTAGTCCTCACCGTCCAATTGGGAGCAGCAAGACTTCTCTTCATGAAATTAGAAGAGTCAGAGAAGCAGGTGGATGGATTAACAATGGTAGAATTTGTGGAGACATTGCTGTATCTCGTGCATTTGGGGACGTGCGATTCAAAACAAAGAAGAATGAGATGCTGCAAAAAGGAGTTCAGGAAGGAAGATGGTCAGCAAAGTTCATTTCTCGTGTACAACTCAACAACGACTTGGTTGTTGCATACCCTGATATTTATCAAGTAACTCTTGGCTCAGATGCAGAATTTGTAGTATTAGCATCCGATGGCTTATGGGATTACATGAGCAGCTCAGAAGCAGTTTCTTTAGTGAGGGATCAACTACGAAAACACGGAAACATTCAGCAAGCATGTGAAGCGCTTGCAGAAGCCGCTTTGGACCGACGTACACAGGATAATGTCAGCATTATAATTGCTGATTTTGGGAGGACAGACTGGCAGAATGCGCCATTGGAGCGACAAAATACTATACTTGAGCTGGTCCAAGCTCTTGCAACCATTGGAATTGTGTCCATTGGAATCTGGTTTTCATCACAGCTTTCTTTATAG 1179 0.4563 MALSSPHIQRFLLCKLHSRSTAKNRHRNSFTATTTTRSSCCSAIAIDAPSSLTEVPGIRWGSIALQGLREEMEDDIIVRPEGLQGFTFAAVFDGHGGFSSVEFLSANYRDELYKECVEALQGGLLLVEKDFKAIKRALQEAFLKADARLLKRLEMNGEEDESGATSTAVFIGDDELLISHIGDSSAVLCRSGKAEVLTSPHRPIGSSKTSLHEIRRVREAGGWINNGRICGDIAVSRAFGDVRFKTKKNEMLQKGVQEGRWSAKFISRVQLNNDLVVAYPDIYQVTLGSDAEFVVLASDGLWDYMSSSEAVSLVRDQLRKHGNIQQACEALAEAALDRRTQDNVSIIIADFGRTDWQNAPLERQNTILELVQALATIGIVSIGIWFSSQLSL 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01174 392 SUPERFAMILY PP2C-like 51 352 IPR036457 -
Gma06g01174 392 Gene3D - 58 358 IPR036457 -
Gma06g01174 392 Pfam Protein phosphatase 2C 61 344 IPR001932 -
Gma06g01174 392 CDD PP2Cc 58 351 IPR001932 -
Gma06g01174 392 ProSitePatterns PPM-type phosphatase domain signature. 88 96 IPR000222 GO:0043169
Gma06g01174 392 PANTHER PROTEIN PHOSPHATASE 2C 57 6 388 - -
Gma06g01174 392 ProSiteProfiles PPM-type phosphatase domain profile. 59 351 IPR001932 -
Gma06g01174 392 PANTHER PROTEIN PHOSPHATASE 2C 6 388 IPR015655 GO:0004722|GO:0006470
Gma06g01174 392 SMART PP2C_SIG_2 71 351 IPR001932 -
Gma06g01174 392 SMART PP2C_4 49 349 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01174 Gma-Chr6 11048091 11052451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01174 1 328 PP2C-type Phosphatase Gene Family AT4G27800 60.486 1.09e-138 397
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02238 04 52804967 52808967 Gma06g01174 06 11048091 11052451 GST
Gma06g01174 06 11048091 11052451 Gma17g02359 17 41629007 41631097 PCT