Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00385 ATGGCTTACCACCATCATGACCACACCAACCGGAAATCCCTTTTGGACACCCTATACTGCTCCGAAGCAGAGGAGGACTACGGTCATTTCCTAAACAACTCCTCCCCTGCGTCCCCTCCTTTCTTGCTCCAAAGCGACATGTTTTCGGACGAACAAGAGTTGACATCGCTGCTGGGGAAAGAACACCACAACCCTCTAAGCACCTGTCTCCAAACCAACCCTGCCTTGGACTTTGCTCGCCGGGAAGCCGTGGAGTGGATGCTCAAAGTCAACTCCCATTACTCTTTCTCTGCTCTCACCGCTGTTCTTTCGGTCAACTACTTTGACCGTTTTCTCTTCAGCTTCCGCTTTCAGAATGACAAGCCATGGATGGTTCAGCTCGCTGCCGTCGCTTGCCTCTCCATCGCTGCCAAAGTTGAGGAGACGCACGTTCCCTTTCTTATTGACCTTCAACAAGTGGATGAGAGTAGATACTTGTTTGAAGCCAAAACTATTAAAAAGATGGAGATTTTGGTCCTTTCCACTCTTGGATGGAAGATGAACCCCCCAACCCCTCTCTCGTTTCTTGATTACTTCACAAGAAGGCTTGGATCGAAGGATCATCTCTGCTGGGAGTTCCTCAGCAAGTCTCAAGGCGTTCTTCTCTCCCTCCTTGGAGATTCGAGGTTTATGAGTTATCTACCTTCTGTATTGGCAACTGCTACGATGATGCACGTTGTGAAAAGCGTGGAGCCTGGTCTAGAAGCTGAATACAAGAGCCAGCTCTTTGGTATTCTCAGAATCGACAAGGAGAAGCCTGAGAAGGTGAATTCTTGTTGCAAGCTGTTGTTGGAGGTGTGGTCAGGGTACGAGGAGGAGGAGCAGGAGCAGGGGAAGCAATGCATGAAACGCAAGTTTGGAATAGGGTCGATTCCTGGAAGCCCAAACGGCGTGATGGATGTGTCGTTTAGCTGTGATAGTAGCTCCAATGACTCTTCGGTCTCTTCCTCACCGGAACCTTTGTCAAAGAAGAGTAGAAGTGAAGAACAAGAGCAGCTTCTTCTACCAAACCCAAACCATTCCAACTCAGATTTTCTCCATCGCCTTTAA 1089 0.4885 MAYHHHDHTNRKSLLDTLYCSEAEEDYGHFLNNSSPASPPFLLQSDMFSDEQELTSLLGKEHHNPLSTCLQTNPALDFARREAVEWMLKVNSHYSFSALTAVLSVNYFDRFLFSFRFQNDKPWMVQLAAVACLSIAAKVEETHVPFLIDLQQVDESRYLFEAKTIKKMEILVLSTLGWKMNPPTPLSFLDYFTRRLGSKDHLCWEFLSKSQGVLLSLLGDSRFMSYLPSVLATATMMHVVKSVEPGLEAEYKSQLFGILRIDKEKPEKVNSCCKLLLEVWSGYEEEEQEQGKQCMKRKFGIGSIPGSPNGVMDVSFSCDSSSNDSSVSSSPEPLSKKSRSEEQEQLLLPNPNHSNSDFLHRL 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00385 362 PANTHER CYCLINS 30 339 IPR039361 -
Gma06g00385 362 SUPERFAMILY Cyclin-like 165 287 IPR036915 -
Gma06g00385 362 Gene3D - 182 264 - -
Gma06g00385 362 SMART Cyclin_C_2 183 320 IPR004367 -
Gma06g00385 362 MobiDBLite consensus disorder prediction 314 362 - -
Gma06g00385 362 MobiDBLite consensus disorder prediction 314 334 - -
Gma06g00385 362 SMART cyclin_7 85 174 IPR013763 -
Gma06g00385 362 Pfam Cyclin, C-terminal domain 183 290 IPR004367 -
Gma06g00385 362 SUPERFAMILY Cyclin-like 58 181 IPR036915 -
Gma06g00385 362 Gene3D - 68 181 - -
Gma06g00385 362 CDD CYCLIN 80 173 IPR013763 -
Gma06g00385 362 PANTHER CYCLIN D3.1 PROTEIN 30 339 - -
Gma06g00385 362 ProSitePatterns Cyclins signature. 80 111 IPR006671 -
Gma06g00385 362 Pfam Cyclin, N-terminal domain 67 181 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00385 Gma-Chr6 3320825 3322570 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00385 14 362 Core Cell Cycle Gene Families AT5G67260 44.474 6.24e-85 261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00385 06 3320825 3322570 Gma06g00385 06 3320825 3322570 ECH
Gma04g00396 04 3411468 3413268 Gma06g00385 06 3320825 3322570 GST
Gma17g02287 17 40803947 40806018 Gma06g00385 06 3320825 3322570 PCT
Gma14g00752 14 7699475 7701770 Gma06g00385 06 3320825 3322570 PCT
Gma06g00385 06 3320825 3322570 Gma17g02287 17 40803947 40806018 PCT
Gma06g00385 06 3320825 3322570 Gma14g00752 14 7699475 7701770 PCT