Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00380 ATGGAAGCAGGGGAAGATTGCTGCGTCAAGGTCGCAGTTCATGTACGGCCACTCATCGCCGACGAGAAGCTTCAAGGATGCAAAGACTGCGTCACCATCGTTTCAGGGAAGCCGCAGGTACAAATTGGTGCCCACTCCTTTACATTTGATCATGTCTATGGAAGCACCGGTTCTCCCTCAAGTTCCATGTTTGAAGAATGCGTTGCTCCCCTTATTGATGGTTTGTTTCAAGGATATAATGCTACTGTTCTCGCATATGGTCAGACAGGTTCTGGGAAAACGTACACCATGGGAACTGGCTTTAAAGATGGTTGTCAAACAGGAATAGTACCCCAAGTTATGAATGTTTTGTTTAGCAAAATTGGGACCCTAAAGCACCAGATTGATTTTCAGTTGCATGTTTCCTTTATTGAGATTCTAAAAGAAGAAGTAAGAGACTTGCTGGATACCTCCTCCATGAGTAAACCAGAAACTGCAAACGGACATGCAGGAAAAATGACCTCTCCTGGGAAGCCACCAATACAAATTCGTGAGACATCAAATGGTGTCATCACCCTTGCAGGATCTACTGAAGTTAGTGTAGCAACACTAAAAGAAATGGCTGCTTGCTTGGAGCAGGGATCATTGAGCAGAGCAACTGGGAGCACAAATATGAACAACCAATCTAGTCGATCTCACGCCATCTTTACCATCACACTAGAGCAAATGCGCAAGCTCAATATTCCTGGTGACAGCTGTTCAAATGATACCATGAATGAAGAGTATCTTTGTGCCAAGTTGCACTTAGTAGATCTTGCTGGATCAGAACGAGCTAAAAGAACAGGTTCAGATGGTCTGCGTTTTAAGGAAGGAGTTCACATTAACAAAGGCCTCCTAGCACTTGGTAATGTTATTAGTGCACTTGGTGACGAAAAGAAGCGAAAGGAAGGTGTTCATGTTCCATATAGGGATAGTAAACTTACAAGGCTTTTGCAGGATTCACTAGGAGGTAACAGCAGAACTGTCATGATAGCCTGCATAAGTCCTGCTGATATTAATGCTGAGGAAACCCTTAACACTTTGAAGTATGCAAATCGTGCACGCAACATCCAAAATAAGCCTGTTATCAATAGAGACCCCATGTCCAATGAGATGCTAAAAATGCGACAACAACTAGAGTATTTGCAGGCAGAACTTTGTGCTCGTGCTGGCGGCTCTTCTGAGGAAGTTCAGGTAGTCCTTAAGGAAAGAATTACTTGGCTTGAAGCTGCTAATGAAGATCTTTGCCGTGAACTTCATGAATACCGTAGTAGATGCCCTATTGTAGAACAAAGTGAAAGGGAAGCTTATgatggtagcacatacattgtgaagactgatgcagttaagaggagcttacctatcacagaagctgaatatccaatgagtgaaactgtggGTGATTCTAGGGAAATGGAAGAAGTAGCAAAAGAGTGGGAGCACACACTTCTCCAGAATAGTATGGATAGAGAGTTACATGAATTGAATAAACGCTTGCAGCAGAAAGAGTCTGAGATGAAGCTTTTTGGAATATCTGATGCTGAAGTACTCAAGCAGCACTTTGGAAGAAAGATAATGGAATTAGAGGATGAGAAGAGAGTAGTGCAGAGAGAGAGAGATTGTCTTTTGGCTGAAGTTGAAAATCTTGCTGCCAATACTGATGGACAAACACAGAAATTAGAGGATATCCATGCCCAAAAATTGAAAACACTTGAAGCACAGATTCTGGATCTGAAGAAGAAGCAAGAGAGTCAGGTCCAACTTCTGAAGCAAAAGCAAAAAAGTGATGAAGCAGCAAAGAGACTGCAAGATGAAATACAGTGTATAAAAGCCCAAAAGGTTCAACTGCAGCAAAGGATAAAACAAGAAGCCGAACAGTTTCGGCAGTGGAAAGCGTCTAGAGAGAAAGAGCTGTTGCAACAGTTAAAGAAGGAGGGAAGAAGAAATGAGTATGAAAGACACAAGCTGCAGGctttgaatcatcggcagaaattggcaagtatttctgaAAAAACTGAAGAAGCTGCAATGGCCACCAAGAGGTTAAAGGAGTTGCTAGAAGCACGTAAAACTTCCAGCCGAGAAACTTTAGTTACAATGAATGGAAGTGGAGCAAATGGTCAGGGCAATGAGAAGTCTTTACAGCGGTGGCTTGATCATGAACTAGAAGTCATGGTAAAAGAGCATGAAGTCCGTTTTGAGTATGAGAAACAGAGCCAAGTGCGAGCTGCCCTTGCAGAGGAATTAGCCATGCTGAAGCAAGTAAATGAGTTTGCTGCAAAGGGTCTCAGTCCTCCAAGAAAGAATGGATTTGCCAGGGCATCCTCCATGTCACCAAATGCAAGAATGGCCAAAATAGCTTCACTTGAAAACATGCTGAGCATATCATCTAATTCACTTGTGGCAATGGCTTCTCAACTTTCCGAGGCAGAAGAAAGAGAACGAGCCTTCTCAAATCGTGGACGCTGGAATCAGCTGCGCTCTATGGGAGAAGCCAAGAATTTGCTTCAATATATGTTTAATTCTGTTGCAGATGCTAGGTGCCAACTCTGGGAGAACGACATGGAGATCAGAGAAATGAAAGATCAAGTCAAAGAACTTGTCGGTCTCTTACGGCAAAGCGAGATGAAGAGAAAAGAAGTTGAGAAGGAGCTAAAAGTGAGAGAGCAAGCTGTTGGAACCACATTGGCTACACCACCATCTGGAGACTCCCCAAATCCATCGAAACAATATGTCGAAGACATGAAGGGGCCCTTATCTCCAGTGTCTAAACAGCTAAAATACACGCCAGGGGTTGCCAATGGTTTGGTGAGGGAATCAGCAGCATTTGTAGATCAGGGTAGAAGGATGGTACCCATCGGACAGCTGTCAATGAAAAAACTAACAATTGTAGGACAAGCTTCTGGAAAGTTATGGAGGTGGAAAAGAAGTCATCATCAGTGGCTACTACAATTCAAGTGGAAGTGGCAGAAACCATGGAGACTTTCAGAATGGATAGGACACAGTGATGAGACAATCATGAGAACAAAACCACGCTCACAGCCTTTGCCACGTATCAGGGCATTAGGTGCAGTGTAA 3096 0.4163 MEAGEDCCVKVAVHVRPLIADEKLQGCKDCVTIVSGKPQVQIGAHSFTFDHVYGSTGSPSSSMFEECVAPLIDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGCQTGIVPQVMNVLFSKIGTLKHQIDFQLHVSFIEILKEEVRDLLDTSSMSKPETANGHAGKMTSPGKPPIQIRETSNGVITLAGSTEVSVATLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLNIPGDSCSNDTMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPVINRDPMSNEMLKMRQQLEYLQAELCARAGGSSEEVQVVLKERITWLEAANEDLCRELHEYRSRCPIVEQSEREAYDGSTYIVKTDAVKRSLPITEAEYPMSETVGDSREMEEVAKEWEHTLLQNSMDRELHELNKRLQQKESEMKLFGISDAEVLKQHFGRKIMELEDEKRVVQRERDCLLAEVENLAANTDGQTQKLEDIHAQKLKTLEAQILDLKKKQESQVQLLKQKQKSDEAAKRLQDEIQCIKAQKVQLQQRIKQEAEQFRQWKASREKELLQQLKKEGRRNEYERHKLQALNHRQKLASISEKTEEAAMATKRLKELLEARKTSSRETLVTMNGSGANGQGNEKSLQRWLDHELEVMVKEHEVRFEYEKQSQVRAALAEELAMLKQVNEFAAKGLSPPRKNGFARASSMSPNARMAKIASLENMLSISSNSLVAMASQLSEAEERERAFSNRGRWNQLRSMGEAKNLLQYMFNSVADARCQLWENDMEIREMKDQVKELVGLLRQSEMKRKEVEKELKVREQAVGTTLATPPSGDSPNPSKQYVEDMKGPLSPVSKQLKYTPGVANGLVRESAAFVDQGRRMVPIGQLSMKKLTIVGQASGKLWRWKRSHHQWLLQFKWKWQKPWRLSEWIGHSDETIMRTKPRSQPLPRIRALGAV 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00380 1031 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 393 IPR027417 -
Gma06g00380 1031 ProSitePatterns Kinesin motor domain signature. 258 269 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gma06g00380 1031 MobiDBLite consensus disorder prediction 900 914 - -
Gma06g00380 1031 SMART kinesin_4 6 371 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma06g00380 1031 MobiDBLite consensus disorder prediction 152 176 - -
Gma06g00380 1031 Pfam Kinesin motor domain 16 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma06g00380 1031 Gene3D Kinesin motor domain 2 391 IPR036961 -
Gma06g00380 1031 CDD KISc_KIF4 7 364 - -
Gma06g00380 1031 Coils Coil 524 558 - -
Gma06g00380 1031 ProSiteProfiles Kinesin motor domain profile. 8 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma06g00380 1031 Coils Coil 591 639 - -
Gma06g00380 1031 Coils Coil 863 897 - -
Gma06g00380 1031 Coils Coil 567 587 - -
Gma06g00380 1031 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 2 1025 - -
Gma06g00380 1031 PRINTS Kinesin heavy chain signature 216 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma06g00380 1031 PRINTS Kinesin heavy chain signature 313 334 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma06g00380 1031 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma06g00380 1031 PRINTS Kinesin heavy chain signature 259 277 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma06g00380 1031 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-LIKE PROTEIN 2 1025 - -
Gma06g00380 1031 Coils Coil 491 511 - -
Gma06g00380 1031 Coils Coil 674 694 - -
Gma06g00380 1031 MobiDBLite consensus disorder prediction 896 919 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00380 Gma-Chr6 3269105 3280630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00380 9 406 Calmodulin-binding Proteins AT5G65930 32.836 1.54e-52 199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00380 06 3269105 3280630 Gma06g00380 06 3269105 3280630 ECH
Gma04g00389 04 3354539 3366910 Gma06g00380 06 3269105 3280630 GST
Gma17g02297 17 40915176 40930271 Gma06g00380 06 3269105 3280630 PCT
Gma14g00742 14 7542292 7554036 Gma06g00380 06 3269105 3280630 PCT
Gma06g00380 06 3269105 3280630 Gma17g02297 17 40915176 40930271 PCT
Gma06g00380 06 3269105 3280630 Gma14g00742 14 7542292 7554036 PCT