Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00346 ATGTCTGCTCGAAGTGAACACCAATCGGTTCCTCTTTCGGTGCTGCTGAAGCGCGAGTTGGCGAATGAGAAAATTGAGAAGCCCGAGGTTGTTATTTTGCACGGCCAAGCTAGTGAGAATAAGAAAGGAGAGGATTTCACGCTATTGAAGACGgaatgccaaagggtgcttggagatggggtttctacctattctgtttttgggctattcgatggacacaatggatctgctgccgctatttatgccaaggagaatcttctaaataatgttttaagtgcaattccttctgatcttaacagagatgagtgggtagcagcgttgcctagggctttggttgcaggctttgtaaaaactgataaagattttcaagagaaagCACAAACATCAGGAACAACTGTAACCTTTATGATTGTAGAAGGATGGGTTTTAACAGTTGCATCAGTTGGTGATTCCCGTTGCATACTTGAGCCTTCCGAAGGTGGGATTTTTTACTTGTCAGCAGACCATAGACTAGAGAGCAATGAAGAGGAgagggtccgcatcacttctagtggaggtgaggttggtcgtctaaatacaggaggaggcacagagGTTGGTCCTTTGAGATGTTGGCCTGGTGGCTTGTGTCTCTCACGATCCATTGGTGATATGGATGTTGGTGAATTTATTGTCCCTGTACCACATGTAAAGCAAGTGAAGCTTTCCACTGCTGGAGGCAGGATTATTCTCAGCAGTGATGGTGTCTGGGATGCTCTAAGTGCAGAAATGGCCCTTGATTGCTGTCGTGGCATGCCACCTGAGGCTGCAGCAACCCATATTGTGAAAGAATCTGTGCAAGCAAAGGGACTTAGAGATGACACAACCTGCATTGTTATTGACATATTACCCCTGGAGAAGCCACCTACTTCTGTGCCAACACAAAAGAAACCGGTGAAAGGAATGCTTAAGTCTATTTTTCGCAAAAAGTCCTCTGAATCATCAACTTTTATTGAAAAAGAATACCTGGAGCCAGATGTGGTACAGGAACTATACGAGGAAGGGTCTGCTATGCTTTCAGAGAGGTTAGAAACAAAATATCCACTTTGCAACATGTTCAAGTTGTTCATCTGTGCAGTGTGTCAGGTAGAGATTAAACCCGGGGAGGGTATTTCCATACATGAGGGTCTGACTAACCCAGGAAGATTGCGTCCCTGGGATGGGCCTTTCCTTTGCTCAAGTTGCCAAGAAAAGAAAGAAGCTATGGAAGGGAAGCGAACATCAGATAGACTTAGCAGCGGGAGTGACTGA 1290 0.3527 MSARSEHQSVPLSVLLKRELANEKIEKPEVVILHGQASENKKGEDFTLLKTECQRVLGDGVSTYSVFGLFDGHNGSAAAIYAKENLLNNVLSAIPSDLNRDEWVAALPRALVAGFVKTDKDFQEKAQTSGTTVTFMIVEGWVLTVASVGDSRCILEPSEGGIFYLSADHRLESNEEERVRITSSGGEVGRLNTGGGTEVGPLRCWPGGLCLSRSIGDMDVGEFIVPVPHVKQVKLSTAGGRIILSSDGVWDALSAEMALDCCRGMPPEAAATHIVKESVQAKGLRDDTTCIVIDILPLEKPPTSVPTQKKPVKGMLKSIFRKKSSESSTFIEKEYLEPDVVQELYEEGSAMLSERLETKYPLCNMFKLFICAVCQVEIKPGEGISIHEGLTNPGRLRPWDGPFLCSSCQEKKEAMEGKRTSDRLSSGSD 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00346 429 SUPERFAMILY PP2C-like 40 295 IPR036457 -
Gma06g00346 429 SMART PP2C_4 23 293 IPR001932 -
Gma06g00346 429 ProSiteProfiles PPM-type phosphatase domain profile. 24 295 IPR001932 -
Gma06g00346 429 SMART PP2C_SIG_2 56 295 IPR001932 -
Gma06g00346 429 CDD PP2Cc 40 295 IPR001932 -
Gma06g00346 429 Gene3D - 30 300 IPR036457 -
Gma06g00346 429 Pfam Protein phosphatase 2C 59 265 IPR001932 -
Gma06g00346 429 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 2 425 - -
Gma06g00346 429 PANTHER ALPHABET, ISOFORM E-RELATED 2 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00346 Gma-Chr6 3002891 3007128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00346 1 429 PP2C-type Phosphatase Gene Family AT1G47380 80.233 0.0 730
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00346 06 3002891 3007128 Gma06g00346 06 3002891 3007128 ECH
Gma04g00358 04 3065004 3069272 Gma06g00346 06 3002891 3007128 GST
Gma17g02328 17 41316917 41321091 Gma06g00346 06 3002891 3007128 PCT
Gma14g00715 14 7111589 7115830 Gma06g00346 06 3002891 3007128 PCT
Gma06g00346 06 3002891 3007128 Gma17g02328 17 41316917 41321091 PCT
Gma06g00346 06 3002891 3007128 Gma14g00715 14 7111589 7115830 PCT