Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00339 ATGGAGAGAACATTGTCATCCCTTCTACAGATTCAGCCTCCAACCTATGGAAATTTAGTCACTATTCTCAGCATCGACGGAGGTGGTATCAGGGGCATTATCCCCGCAACTATTCTTGCTTTCCTTGAAGCCCAACTTCAGGAGTTGGACGGTGAGGATGCAAGGCTTGCAGACTATTTTGATGTGATTGCTGGAACAAGCACAGGTGGTATTGTAACAGCTATGCTAAGTGCTCCAAATGATAATCAGCGTCCTCTATTTGCAGCCAAGGATATCAAGCCCTTTTACTTGGAACATTGCCCAAAGATTTTCCCACAACACAGGTATTTGCTGGGATCGTTGGGAGGACCAAAATACGATGGAAAATACCTTAAAGAAGTGGTGAGAGAGAAACTAGGGCAGACACGTTTGCATGAAACGCTGACGAATATAGTGATTCCCACGTTTGACATAAAGACATTGCAACCAATCATTTTCTCCTCTTACCAAATCAAGAGGTCTCCTTGCTTGGATGCTCGACTCTCTGACATATGCATCAGCACTTCTGCCGCACCTACTTATCTTCCAGCCTACCACTTCAAGAACCAAGATTCACAAGGAAACACGCACGAATTCAACCTTATTGATGGTGGCGTTTGTGCTAATAATCCGACTTTAGTGGCGATGAATCAAGTAACAAAGCAGATAATTAATGAAAATCCGGACTTCTTTTCCATCAAGCCAATGGAATATGGTCGTTTCCTGATAATCTCTCTAGGCACTGGAACCCCTAAGAATGAACAGAAATTCAATGCACAAATGGCAGCAAAATGGGGTCTGTTGGATTGGTTAACCAATTCTGGTTCTACTCCCTTAATCGATGTGTTTACTCAGTCCAGCGCAGATATGGTTGATTTTCATCTTGCTACCGTCACTCAAGCACTGCATTCAGAAAATAATTACCTTCGGATACAGGATGATACATTGACCGGTACAGACTCTTCAGTTGATATTGCCACAAAAGAGAATTTGGAAAAACTTAGCCAAATTGGTGAGAGGTTGTTGAAGAAACCAGTATCTCAGATCAATTTGGAGGATGGTCTGTTTGAATCGGTAGGAAATGGGGAGACCAATGAAAATGCTCTCAAAAGGTTTGCGAAAATACTTTCGCAAGAGAGGAGGCTCCGAGAATCAAAATCCCCTCACACTAAGAAGGTCCCAAGCTACTTTGCTCGTGAATTCTGA 1224 0.4289 MERTLSSLLQIQPPTYGNLVTILSIDGGGIRGIIPATILAFLEAQLQELDGEDARLADYFDVIAGTSTGGIVTAMLSAPNDNQRPLFAAKDIKPFYLEHCPKIFPQHRYLLGSLGGPKYDGKYLKEVVREKLGQTRLHETLTNIVIPTFDIKTLQPIIFSSYQIKRSPCLDARLSDICISTSAAPTYLPAYHFKNQDSQGNTHEFNLIDGGVCANNPTLVAMNQVTKQIINENPDFFSIKPMEYGRFLIISLGTGTPKNEQKFNAQMAAKWGLLDWLTNSGSTPLIDVFTQSSADMVDFHLATVTQALHSENNYLRIQDDTLTGTDSSVDIATKENLEKLSQIGERLLKKPVSQINLEDGLFESVGNGETNENALKRFAKILSQERRLRESKSPHTKKVPSYFAREF 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00339 407 PANTHER PATATIN 1 398 - -
Gma06g00339 407 SUPERFAMILY FabD/lysophospholipase-like 18 359 IPR016035 -
Gma06g00339 407 CDD Pat17_isozyme_like 17 360 - -
Gma06g00339 407 MobiDBLite consensus disorder prediction 387 407 - -
Gma06g00339 407 Pfam Patatin-like phospholipase 23 222 IPR002641 GO:0006629
Gma06g00339 407 PANTHER XYLOSE ISOMERASE 1 398 - -
Gma06g00339 407 Gene3D Cytosolic phospholipase A2 catalytic domain 10 395 - -
Gma06g00339 407 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 23 222 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00339 Gma-Chr6 2954762 2957881 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00339 11 397 Miscellaneous Gene Families AT2G26560 64.467 0.0 527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00339 06 2954762 2957881 Gma06g00339 06 2954762 2957881 ECH
Gma17g02338 17 41368267 41371374 Gma06g00339 06 2954762 2957881 PCT
Gma14g00701 14 7044620 7046454 Gma06g00339 06 2954762 2957881 PCT
Gma06g00339 06 2954762 2957881 Gma17g02338 17 41368267 41371374 PCT
Gma06g00339 06 2954762 2957881 Gma14g00701 14 7044620 7046454 PCT