Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00331 ATGGAAGCAACCAACAGAAGCTCTTCCTCCACTTCCTCTTCCTCTGATTGCTGCTCTTCCGAGTCCAACCCCAACAAGCCCGACAGAATCAAAGGCCCATGGAGCGCCGAAGAGGATCGGATCCTGACCGGACTCGTCGAACGATACGGCCCACGAAATTGGTCCCTCATCAGCCGCTACATTAAGGGAAGGTCCGGCAAGTCATGCCGGCTCCGATGGTGCAATCAGCTTAGCCCCGCCGTGGAGCACCGCCCCTTCTCGGCCCAAGAGGACGACACCATCATCGCGGCCCATGCCCAGTATGGTAACAGGTGGGCCACTATAGCCCGATTGCTACCGGGCCGAACCGATAACGCCGTTAAGAACCACTGGAACTCCACTCTCAAGCGCAGAGCCAAAGGTATTAACATTAATGTTAATCACGCCAACAACGAAGTGGCTGCTTCTTCTTCCGCTCCTTCTCGCCACTTCGACTTCGAGGATGATCCGTTGACCGCGTTGACTCTCGCTCCTCCTGGTATTGCTAATGGCACTGTGGCGGAGGACGCCGTGCCGGACCATCGTGCCTCGCCGGAGGGGTTTTGGGATATGATGAGGGATGTGATCGCGAGGGAAGTGAGGGAATATGTGTCTTCCAATTTTTCTGATAACTCGGGTTTTCATTAA 666 0.5541 MEATNRSSSSTSSSSDCCSSESNPNKPDRIKGPWSAEEDRILTGLVERYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPAVEHRPFSAQEDDTIIAAHAQYGNRWATIARLLPGRTDNAVKNHWNSTLKRRAKGININVNHANNEVAASSSAPSRHFDFEDDPLTALTLAPPGIANGTVAEDAVPDHRASPEGFWDMMRDVIAREVREYVSSNFSDNSGFH 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00331 221 ProSiteProfiles Myb-like domain profile. 26 77 IPR001005 -
Gma06g00331 221 CDD SANT 85 128 IPR001005 -
Gma06g00331 221 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 132 IPR017930 -
Gma06g00331 221 ProSiteProfiles Myb-like domain profile. 78 128 IPR001005 -
Gma06g00331 221 Pfam Myb-like DNA-binding domain 34 91 - -
Gma06g00331 221 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 26 81 IPR017930 -
Gma06g00331 221 PANTHER MYB TRANSCRIPTION FACTOR 2 206 - -
Gma06g00331 221 SUPERFAMILY Homeodomain-like 28 124 IPR009057 -
Gma06g00331 221 SMART sant 30 79 IPR001005 -
Gma06g00331 221 SMART sant 82 130 IPR001005 -
Gma06g00331 221 MobiDBLite consensus disorder prediction 1 26 - -
Gma06g00331 221 Gene3D - 30 82 - -
Gma06g00331 221 CDD SANT 33 75 IPR001005 -
Gma06g00331 221 PANTHER MYB PROTEIN-RELATED 2 206 - -
Gma06g00331 221 Gene3D - 84 155 - -
Gma06g00331 221 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00331 Gma-Chr6 2873111 2874149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00331 28 134 MYB Transcription Factor Family AT3G50060 76.636 2.23e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma06g00331 Myb_DNA-bind_6 1.4e-15 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00331 06 2873111 2874149 Gma06g00331 06 2873111 2874149 ECH
Gma04g00344 04 2940278 2941338 Gma06g00331 06 2873111 2874149 GST
Gma17g02348 17 41493510 41494396 Gma06g00331 06 2873111 2874149 PCT
Gma06g00331 06 2873111 2874149 Gma17g02348 17 41493510 41494396 PCT