Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00328 ATGAGTACCACCAAGTGTAACAAGCTCTCTTCTACTTCACCTACGATTCACCAGCGTAGGCTCACCCGCCAGAGGAAGCTTCGCTACACCAGTGACAAAGACGCTGCTCTGCATTCAACTACCTCTCTACCCGCTTCTCCTCTTCCTTCCTTTAAGTCCGCTTCCAGTTCCGACCATTGGTCTTCCTCTGCGGTTCCTCAACCGCTTCCGCGTCCCGATTCCCCGTGGATCCGCCGTCACGACCATCATCACCTCGGATCTCCCCCTTTCGAACATCCTGCTTTCTCTTTTCGCAGAAGGTCGGTCGATCATGATGCGGTGAGAAGTTTAAGGTCTGCGAGCAATTTGGGGAGACCTTCTTTTGATCCGGTGACTCCCAATGCTAAATATGATTTGAGAGTAAATATTCCGCCCGCCAGAGTGTTGGCAGGCAATACTAGTTCGTGTAAAGATCACAGAGAACTCTCTCATGACCATGACTCTGAAAATGTTTCCAACTTGAGATTGCATTTTGCGGCCAAGAGTGCCCCCAACAGCATATTCTCCAGTCCTGTTACTAGTCCACGTAGGTCCAGCAATGTAGATTTTTATGACATTTTGAAAGTGTCACCGGCTAAAACTGCTCAGAGTCCAGACCGGTCTCCTCTGCGCAGCCCTGGGAGCCACCTCAATCAAGAGGGGTCTCAGCTTCATAAATTTTCCTCCAGAGTGTGGCCTGAAAATAATCATGTGGATGCAAATCCACATCCACTGCCCCTTCCTCCTAAAGCTTCACCACAGACTGCACACTCATCTCCGCAGCATCAGCCAAGTATCGTGCACCTCAACACAGAAAATTTGCCTTCAATGAAAGGTCAATGGCAGAAAGGAAAACTTATAGGGCGTGGATCATTTGGATCTGTTTATCATGCAACCAACTTAGAGACTGGAGCCTCGTGTGCATTGAAAGAGGTGGATCTGTTCCCTGATGATCCTAAATCTGCTGACTGCATAAAGCAACTTGAGCAGGAAATCAGAATTCTCCGTCAATTACACCACCCCAACATTGTGCAGTATTATGGCAGTGAAATAGTTGGTGATCGATTGTACATATATATGGAGTATGTTCATCCTGGATCACTTCATAAATTTATGCATGAACATTGTGGAGCTATGACAGAGTCTGTGGTTCGCAATTTCACACGACATATTCTCTCTGGATTGGCATACTTACATGGTACCAAGACTATTCACAGGGATATCAAAGGTGCAAACTTGTTGGTCGATGCATCAGGCAGTGTTAAGCTTGCAGATTTTGGGGTGTCAAAAATTCTGACAGAGAAATCATATGAActatcattgaagggaagtccctactggatggctcctgagCTCATGAAAGCTTCCATAAAGAAAGAGTCCAGTCCTGACATTGCCATGGCCAttgatatatggagcttagggtgcactatcattgaaatgctgacaggaaaacctccttggagcgaatttgaagggGTGTATTCTGTGTACTAG 1515 0.4304 MSTTKCNKLSSTSPTIHQRRLTRQRKLRYTSDKDAALHSTTSLPASPLPSFKSASSSDHWSSSAVPQPLPRPDSPWIRRHDHHHLGSPPFEHPAFSFRRRSVDHDAVRSLRSASNLGRPSFDPVTPNAKYDLRVNIPPARVLAGNTSSCKDHRELSHDHDSENVSNLRLHFAAKSAPNSIFSSPVTSPRRSSNVDFYDILKVSPAKTAQSPDRSPLRSPGSHLNQEGSQLHKFSSRVWPENNHVDANPHPLPLPPKASPQTAHSSPQHQPSIVHLNTENLPSMKGQWQKGKLIGRGSFGSVYHATNLETGASCALKEVDLFPDDPKSADCIKQLEQEIRILRQLHHPNIVQYYGSEIVGDRLYIYMEYVHPGSLHKFMHEHCGAMTESVVRNFTRHILSGLAYLHGTKTIHRDIKGANLLVDASGSVKLADFGVSKILTEKSYELSLKGSPYWMAPELMKASIKKESSPDIAMAIDIWSLGCTIIEMLTGKPPWSEFEGVYSVY 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00328 504 MobiDBLite consensus disorder prediction 34 64 - -
Gma06g00328 504 MobiDBLite consensus disorder prediction 205 269 - -
Gma06g00328 504 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 7 500 - -
Gma06g00328 504 MobiDBLite consensus disorder prediction 74 88 - -
Gma06g00328 504 SUPERFAMILY Protein kinase-like (PK-like) 263 497 IPR011009 -
Gma06g00328 504 MobiDBLite consensus disorder prediction 1 93 - -
Gma06g00328 504 SMART serkin_6 287 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g00328 504 Gene3D Transferase(Phosphotransferase) domain 1 284 504 - -
Gma06g00328 504 MobiDBLite consensus disorder prediction 207 236 - -
Gma06g00328 504 MobiDBLite consensus disorder prediction 1 18 - -
Gma06g00328 504 Pfam Protein kinase domain 288 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g00328 504 ProSitePatterns Protein kinases ATP-binding region signature. 293 316 IPR017441 GO:0005524
Gma06g00328 504 ProSiteProfiles Protein kinase domain profile. 287 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g00328 504 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 7 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00328 Gma-Chr6 2845527 2851753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00328 16 504 MAP Kinase Kinase Kinase AT5G66850 44.080 9.26e-128 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gma06g00328 Pkinase 2.4e-57 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00328 06 2845527 2851753 Gma06g00328 06 2845527 2851753 ECH
Gma04g00341 04 2916966 2923060 Gma06g00328 06 2845527 2851753 GST
Gma17g02349 17 41497961 41503006 Gma06g00328 06 2845527 2851753 PCT
Gma14g00691 14 6912346 6919105 Gma06g00328 06 2845527 2851753 PCT
Gma06g00328 06 2845527 2851753 Gma17g02349 17 41497961 41503006 PCT
Gma06g00328 06 2845527 2851753 Gma14g00691 14 6912346 6919105 PCT