Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00252 ATGGACCTCGATCCTCGTCAATATGAAAACCTTGCTGTAAATGATAATGACATCCACAACATTGTTCTGTCATATCTTATACATAATTGCTACAAAGAATCAGTAGAATCATTCATTGCTTGCACTGGGGCAACGCAGCCGGCAGATTATTTGGAAGACATGGATAAAAGGAAAAGAATCTTTCACTTTGCACTAGAGGGAAATGCACTCAAGGCTATTGAGCTTACTGAACAGCTGGCAAAAGATATTCTAGAGAACAATAAGGATTTGCAGTTTGATCTACTAAGCCTTCATTTTGTTGAGCTTGTCTGCTCAAGGAAATGCACAGAAGCTTTGGAGTTTGCTCAGACCAAATTGGGCCCTTTCGGAAAGGAGCCCAAATATATGGAAAAGCTTGAAGACTTTATGGCCCTTCTTGCTTATAAGGAGCCAGAGAAATCCCCAATGTTTCATCTCCTTAGCTTAGAGTATCGGCAACAGGTTGCAGATAGTTTGAATCGAGCTATTCTTGCACACTTGAATCTTCCCAGTTACACAGCAATGGAGAGGCTAATACAGCAGGCTACAGTTGTAAGACAATGCTTAAGTCAAGAAGCTGGCAAGGATGCACCTCCACCATTTTCCTTAAAGGATTTTCTCAGAAGTTGA 648 0.4105 MDLDPRQYENLAVNDNDIHNIVLSYLIHNCYKESVESFIACTGATQPADYLEDMDKRKRIFHFALEGNALKAIELTEQLAKDILENNKDLQFDLLSLHFVELVCSRKCTEALEFAQTKLGPFGKEPKYMEKLEDFMALLAYKEPEKSPMFHLLSLEYRQQVADSLNRAILAHLNLPSYTAMERLIQQATVVRQCLSQEAGKDAPPPFSLKDFLRS 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00252 215 Pfam CTLH/CRA C-terminal to LisH motif domain 54 192 IPR024964 -
Gma06g00252 215 SMART toby_final6 106 201 IPR013144 -
Gma06g00252 215 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 53 110 IPR006595 -
Gma06g00252 215 SMART ctlh 53 110 IPR006595 -
Gma06g00252 215 PANTHER VACUOLAR IMPORT AND DEGRADATION PROTEIN 30 8 214 - -
Gma06g00252 215 PANTHER RAN BINDING PROTEIN 9-RELATED 8 214 - -
Gma06g00252 215 ProSiteProfiles LIS1 homology (LisH) motif profile. 14 46 IPR006594 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00252 Gma-Chr6 2246616 2249803 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00252 06 2246616 2249803 Gma06g00252 06 2246616 2249803 ECH
Gma04g00267 04 2339580 2342245 Gma06g00252 06 2246616 2249803 GST
Gma17g02428 17 42259303 42262100 Gma06g00252 06 2246616 2249803 PCT
Gma06g00252 06 2246616 2249803 Gma17g02428 17 42259303 42262100 PCT