Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00081 ATGCAAAGGGTGAGGCAAGGCGAAGAAGAAGTAGCATCAGGGGGTTCAAAGTGCCAAGACTGTGGGAACCAAGCCAAGAAGGAATGTTCATACTTACGGTGCAGGACTTGCTGCAAGAACAAAGGTTTTCACTGCCAAACCCATATCAAGAGCACTTGGACTCCTGTGGATCATAGGAGACGCCACTTTCAGGGTCAGGGAGGAGATCATCATATTCCTCAAAACCAAAACCAGATCAACCCATATTCAGGTTTAGAGTTGAGATTTCCGGCTGCTACGAATTCGATGGCTACATTTCGGTGCATTCACGTTCGTTCTATGGATGATGCGGTTAATGAAATAGCGTATCAAACATCTGTGAACATTGGAGGGCATGTATTTAGTGGACTACTATATGATCAAGGCCCTGAGTACCAAAGAGGTCATCAAGGTGAGAGTTCCACGGGCTTTGTTGATAAGCAGCAGAATAATAATAATAATAATCTGGATAGTAGTGGTGCAAGTGCAACTCACCAAGAGTACCCGTTTCCCCTTTCTTCCTTCAGGCCCGGTATGCCCTATTTGACATACCCAAGATCTTAG 582 0.4519 MQRVRQGEEEVASGGSKCQDCGNQAKKECSYLRCRTCCKNKGFHCQTHIKSTWTPVDHRRRHFQGQGGDHHIPQNQNQINPYSGLELRFPAATNSMATFRCIHVRSMDDAVNEIAYQTSVNIGGHVFSGLLYDQGPEYQRGHQGESSTGFVDKQQNNNNNNLDSSGASATHQEYPFPLSSFRPGMPYLTYPRS 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00081 193 PANTHER BNAC01G23660D PROTEIN 2 173 - -
Gma06g00081 193 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 88 136 IPR006511 -
Gma06g00081 193 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 17 58 IPR006510 -
Gma06g00081 193 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 2 173 IPR007818 GO:0003700|GO:0006355
Gma06g00081 193 MobiDBLite consensus disorder prediction 140 175 - -
Gma06g00081 193 MobiDBLite consensus disorder prediction 1 22 - -
Gma06g00081 193 MobiDBLite consensus disorder prediction 137 175 - -
Gma06g00081 193 Pfam Domain of unknown function (DUF702) 85 137 - -
Gma06g00081 193 Pfam Domain of unknown function (DUF702) 15 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00081 Gma-Chr6 737531 738502 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Gma06g00081 DUF702 1.3e-18 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00081 06 737531 738502 Gma06g00081 06 737531 738502 ECH
Gma04g00260 04 2265079 2281599 Gma06g00081 06 737531 738502 ECH
Gma06g00081 06 737531 738502 Gma11g01036 11 8782079 8783164 ECH
Gma06g00081 06 737531 738502 Gma12g00349 12 2877924 2879038 ECH
Gma16g01234 16 30376485 30378109 Gma06g00081 06 737531 738502 ECH
Gma17g02436 17 42323263 42326608 Gma06g00081 06 737531 738502 ECH
Gma04g00086 04 760256 761443 Gma06g00081 06 737531 738502 GST
Gma04g00260 04 2265079 2281599 Gma06g00081 06 737531 738502 GST
Gma17g02436 17 42323263 42326608 Gma06g00081 06 737531 738502 PCT
Gma14g02108 14 52194372 52196139 Gma06g00081 06 737531 738502 PCT
Gma06g00081 06 737531 738502 Gma17g02436 17 42323263 42326608 PCT
Gma06g00081 06 737531 738502 Gma14g02108 14 52194372 52196139 PCT