Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01383 ATGGATGATGATGTGTTGAACATGCCCAATTGGGGTTATTATGAACCCTTCAGGGGGGGACATCTTGGTCTTCAGCTCATGCCTGGAATAACTGAACGAGACACAAAGCCATTTTTGCCTGGTCGTGATCCGGCTATGCTAATGGGTGCAAATGGAACTTTTCACCCACGAGATTGCGCTGTTTCAGAGGCACCAATGCCATTGAACTATGTCAGAGATAATTGGATAAACCCGAGAGATAGGTTTTTTAATATGCAGCAGCCCACAAATCCTAGTTATGCTGTTCTTCCAGAGACATCAGGAGCTCCTAACTTGCAAATTATACAGCCACCTGATTCGTCAAGTGACGAGAAAGTGGATAGAGTCGAAGAGGTAGCTGTCAAAAAGGAAGGTGGCCAGTCAAAGAAAAGGCAAACTAAGGGTGCTCTGTCGACTCCAAAAGCTAAGAAACCTAGGAAGCCGAAGGATAATGGCAATGCTCCAGTTCAACGTGCGAAGCCACCGAAGAAGACTATGGAGCTTGTGATTAATGGAATTGATATGGACATTTCTGGTCTACCTACTCCGGTTTGTTCATGCACTGGGGCTCCTCAGCAGTGTTATAGGTGGGGCTGTGGAGGTTGGCAATCGGCTTGTTGCACCACAAATGTGTCAATATATCCTTTGCCAATGAGCATGAAAAGGCGTGGTGCAAGGATAGCTGGGCGGAAAATGAGCCAAGGTGCTTTTAAAAAGGTTTTAGAGAAACTTGCTGCTGAAGGTTATAACTTTGCTAACCCTATTGATCTGAAGACTCATTGGGCCAGACACGGCACCAACAAGTTTGTCACTATCAGGTAG 840 0.4583 MDDDVLNMPNWGYYEPFRGGHLGLQLMPGITERDTKPFLPGRDPAMLMGANGTFHPRDCAVSEAPMPLNYVRDNWINPRDRFFNMQQPTNPSYAVLPETSGAPNLQIIQPPDSSSDEKVDRVEEVAVKKEGGQSKKRQTKGALSTPKAKKPRKPKDNGNAPVQRAKPPKKTMELVINGIDMDISGLPTPVCSCTGAPQQCYRWGCGGWQSACCTTNVSIYPLPMSMKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANPIDLKTHWARHGTNKFVTIR 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01383 279 MobiDBLite consensus disorder prediction 114 136 - -
Gma05g01383 279 MobiDBLite consensus disorder prediction 87 169 - -
Gma05g01383 279 Pfam GAGA binding protein-like family 1 279 IPR010409 -
Gma05g01383 279 SMART GAGA_bind_2 1 279 IPR010409 -
Gma05g01383 279 MobiDBLite consensus disorder prediction 87 113 - -
Gma05g01383 279 PANTHER PROTEIN BASIC PENTACYSTEINE2-LIKE 1 279 - -
Gma05g01383 279 PANTHER - 1 279 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01383 Gma-Chr5 35504180 35506142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01383 1 279 BBR or BPC Transcription factor family AT2G01930 57.667 1.04e-108 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Gma05g01383 GAGA_bind 6.4e-105 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01383 05 35504180 35506142 Gma08g00866 08 7144041 7145988 GST