Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01341 ATGGCGCCGAGCACCGGAGACGTGCAACTAACTTCCCCCGCCTCCGGCGAAGATTCCGACGACCTCGAAGACGTTCGCCTCCTCGACTCCTACGACAAAAACGACGTCGTTCACGATGAAACGAAAAGAATTCAGGTCAGAATCACCGGCATGACCTGCGCCGCGTGCTCCAACTCCGTCGAAACGGCTCTCCGGTCCGTTCACGGCATCACCGAAGCCTCCGTCGCTCTTCTTCAAAACAAAGCCGACGTCGTTTTCGTCCCCGGCCTCGTCAAGGATGAGGATATCAAGAATGCGATTGAAGACGCAGGTTTCGAGGCCGAGATCTTGCCGGACTCCGGTGCGGTGGCGCACGGCGGAGCCGCCGCCGCCGTGGTGGGGCAGTTCACCATCGGCGGGATGACGTGTGCGGCATGTGTGAATTCCATTGAAGGCATTCTGAGGAACCTCAACGGAGTGAAAAGAGCAGTGGTGGCTCTGGCAACTTCGTTGGGCGAGGTTGAGTATGATCCCAACGTGATAAGCAAGGACGATATTGTGGCTGCGATTGAAGACGCGGGTTTCGAGGGCACGTTTGTGCAGAGCAACGGGCAGGACCAGATTGTGTTAGGGGTGAGTGGCGTGTACTCTCTTGGTGATGCTCAGGTTCTGGAAGCGATGCTGAGTGGCACCAAAGGGGTGAGGCAGTTTCGGTTCGACACGGCGGTGAACGAGCTTGATGTGGTGTTTGACCCTGAAGTTATCAGCTCGAGGTCGTTGGTTGATGGGATCCAGTTGGGGAGTAATGGCAGGTTCAAATTGCATGTTAGGAATCCTTACGCTAGGATGGCTTCTAAAGATGGTTCAGAAAGCTCCACTATGTTTCGCCTTTTTATTTCCAGCTTGTTTCTCAGTATTCCTCTCTTCTTCATGGGGGTGATTTGTCCTCATATACCATTGGTTTACTCTTTATTACTTTGGAGATGTGGGCCTTTTCTCATGGGTGATTGGCTGAATTGGGCGTTGGTGAGTGTCATTCAATTTGTGATTGGGAAACGCTTCTATATAGCAGCTGGAAGAGCTCTTAGAAATGGTTCAACAAACATGGATGTCCTGGTTGCTTTGGGAACTACAGCCTCTTATGCTTATTCTGTTTGTGCTCTTCTGTATGGTGCCCTTACAGGATTTTGGTCTCCAACATACTTTGAAACAAGCGCTATGCTTATAACATTTGTATTGTTGGGCAAGTATTTGGAGTGCCTTGCCAAGGGAAAGACCTCTGATGCCATTAAGAAGCTAGTGGAACTTACTCCTGCAACAGCTTTATTGATTGCCAAAGATAAAGGTGGTAGAACTGTTGAAGAAAGGGAAATAGATTCCTTGCTCATTCAACCTGGTGACACATTAAAAGTTCTTCCTGGTACAAAGATTCCTGCTGATGGTATTGTTACTTGGGGCTCAAGTTATGTAAATGAGAGTATGGTGACTGGTGAATCTATACCCGTTTCAAAGGAGGTCAATGCATCTGTTATTGGAGGTACGATCAATTTGCATGGCGTCCTTCACGTTCAAGCCACCAAAGTAGGATCTGATACAGTTTTGAGTCAGATAATTAGTTTGGTGGAGACAGCCCAGATGTCCAAAGCTCCCATTCAAAAGTTTGCTGATTATGTTGCAAGCATATTTGTTCCTACAGTTGTGGTGTTGGCATTATTGACACTATTGTGTTGGTATGTAGCTGGGGCTCTTGGAGCATACCCAGATGAATGGCTGCCAAAAAATGGAAATCACTTTGTTTTTGCTCTTATGTTTTCAATATCTGTTGTGGTGATTGCATGTCCATGTGCACTTGGTTTGGCAACACCAACTGCTGTCATGGTGGCAACAGGGGTTGGGGCCAACAATGGTGTGTTAATTAAAGGAGGAGACTCCTTGGAAAGGGCTCAGATGGTGAAGTACGTCATATTTGATAAAACAGGCACTCTAACTCAGGCAAAAGCCACTGTTACTGTTGCTAAAGTGTTTGGAGGAATGGACCGTGGAGATTTTCTTACATTGGTGGCTTCTGCTGAGGCTAGCAGTGAACACCCACTGGCAAAAGCAATATTGCAATACGCTCGCCATTTTCATTTCTTTGATGAGTCTTCTCCTACCAGTGATACCAAGAGTGCTTCTGAGGACTACAAGTCAGGGTGGCTTTATGATGTCTCAGACTTCTCTGCTCTTCCAGGAAGGGGCATCCAGTGCTTTATAGATGGGAGGCGTATTTTGGTTGGTAACCGGAAGCTGCTGGAGGAAAATGGCATAAATATTTCTACAGAAGTCGAAAATTTTGTAGTAGAGCTTGAAGAAAGTGCAAAGACAGGGATACTAGTTGCATATGATGATATATTAATTGGAGTCTTAGGGATTGCAGACCCACTAAAGAGAGAAGCTGCTGTTGTTATAGAGGGCCTACAGAAAATGGGAGTCATACCTGTGATGGTTACAGGAGATAACTGGAGAACAGCTCGAGCTGTAGCCAAAGAGGTTGGCATTCAAGATGTTAGGGCAGAAGTTATGCCTGCAGGAAAGGCTGATGTTGTTCGTTCATTCCAAAAGGATGGAAGTATAGTTGCAATGGTGGGTGATGGCATCAATGACTCTCCAGCATTAGCTGCTGCAGATGTTGGTATGGCAATTGGGGCTGGGACAGATGTTGCAATAGAAGCTGCTAACTATGTGCTGATGAGAGATAACTTGGAAGATGTGATCACTGCCATTGATCTTTCCAAAAAGACCTTTTTCCGTATTCGATTGAATTATGTATTTGCGATGGCTTACAATGTTGTTGCTATACCAGTTGCTGCCGGGGTTTTCTTTCCTTGGTTGGGGATCAAGCTGCCACCATGGGTTGCTGGTGCATGCATGGCTCTGTCGTCTGTAAGCGTTGTATGCTCTTCTTTGCTTTTGAGAAGATATAGAAAACCCAAACTTACTACAATACTTGAAATAGTTGTAATTTAA 2985 0.4657 MAPSTGDVQLTSPASGEDSDDLEDVRLLDSYDKNDVVHDETKRIQVRITGMTCAACSNSVETALRSVHGITEASVALLQNKADVVFVPGLVKDEDIKNAIEDAGFEAEILPDSGAVAHGGAAAAVVGQFTIGGMTCAACVNSIEGILRNLNGVKRAVVALATSLGEVEYDPNVISKDDIVAAIEDAGFEGTFVQSNGQDQIVLGVSGVYSLGDAQVLEAMLSGTKGVRQFRFDTAVNELDVVFDPEVISSRSLVDGIQLGSNGRFKLHVRNPYARMASKDGSESSTMFRLFISSLFLSIPLFFMGVICPHIPLVYSLLLWRCGPFLMGDWLNWALVSVIQFVIGKRFYIAAGRALRNGSTNMDVLVALGTTASYAYSVCALLYGALTGFWSPTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELTPATALLIAKDKGGRTVEEREIDSLLIQPGDTLKVLPGTKIPADGIVTWGSSYVNESMVTGESIPVSKEVNASVIGGTINLHGVLHVQATKVGSDTVLSQIISLVETAQMSKAPIQKFADYVASIFVPTVVVLALLTLLCWYVAGALGAYPDEWLPKNGNHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDSLERAQMVKYVIFDKTGTLTQAKATVTVAKVFGGMDRGDFLTLVASAEASSEHPLAKAILQYARHFHFFDESSPTSDTKSASEDYKSGWLYDVSDFSALPGRGIQCFIDGRRILVGNRKLLEENGINISTEVENFVVELEESAKTGILVAYDDILIGVLGIADPLKREAAVVIEGLQKMGVIPVMVTGDNWRTARAVAKEVGIQDVRAEVMPAGKADVVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDVAIEAANYVLMRDNLEDVITAIDLSKKTFFRIRLNYVFAMAYNVVAIPVAAGVFFPWLGIKLPPWVAGACMALSSVSVVCSSLLLRRYRKPKLTTILEIVVI 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01341 994 ProSitePatterns Heavy-metal-associated domain. 48 78 IPR017969 GO:0046872
Gma05g01341 994 SUPERFAMILY Calcium ATPase, transduction domain A 448 534 IPR008250 -
Gma05g01341 994 Gene3D - 127 192 - -
Gma05g01341 994 Pfam E1-E2 ATPase 429 627 - -
Gma05g01341 994 ProSitePatterns Heavy-metal-associated domain. 131 160 IPR017969 GO:0046872
Gma05g01341 994 SUPERFAMILY HAD-like 647 974 IPR036412 -
Gma05g01341 994 CDD P-type_ATPase_Cu-like 289 964 - -
Gma05g01341 994 Gene3D - 615 925 IPR023214 -
Gma05g01341 994 SFLD C1.7: P-type atpase like 630 919 - -
Gma05g01341 994 MobiDBLite consensus disorder prediction 1 23 - -
Gma05g01341 994 PANTHER ATP7, ISOFORM B 3 987 - -
Gma05g01341 994 Pfam haloacid dehalogenase-like hydrolase 644 882 - -
Gma05g01341 994 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 362 977 IPR027256 GO:0006812|GO:0016021|GO:0019829
Gma05g01341 994 SUPERFAMILY Calcium ATPase, transmembrane domain M 382 957 IPR023298 -
Gma05g01341 994 ProSiteProfiles Heavy-metal-associated domain profile. 43 109 IPR006121 GO:0046872
Gma05g01341 994 ProSiteProfiles Heavy-metal-associated domain profile. 126 192 IPR006121 GO:0046872
Gma05g01341 994 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 747 947 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma05g01341 994 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 401 673 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma05g01341 994 Pfam Heavy-metal-associated domain 129 189 IPR006121 GO:0046872
Gma05g01341 994 Pfam Heavy-metal-associated domain 46 106 IPR006121 GO:0046872
Gma05g01341 994 ProSitePatterns E1-E2 ATPases phosphorylation site. 650 656 IPR018303 -
Gma05g01341 994 Gene3D - 41 112 - -
Gma05g01341 994 SUPERFAMILY HMA, heavy metal-associated domain 128 196 IPR036163 GO:0046872
Gma05g01341 994 SFLD p-type atpase 630 919 IPR044492 -
Gma05g01341 994 PRINTS P-type cation-transporting ATPase superfamily signature 484 498 - -
Gma05g01341 994 PRINTS P-type cation-transporting ATPase superfamily signature 648 662 - -
Gma05g01341 994 PRINTS P-type cation-transporting ATPase superfamily signature 793 804 - -
Gma05g01341 994 PRINTS P-type cation-transporting ATPase superfamily signature 815 825 - -
Gma05g01341 994 PRINTS P-type cation-transporting ATPase superfamily signature 868 887 - -
Gma05g01341 994 PRINTS P-type cation-transporting ATPase superfamily signature 891 903 - -
Gma05g01341 994 TIGRFAM TIGR00003: copper ion binding protein 44 107 IPR006122 GO:0005507
Gma05g01341 994 TIGRFAM TIGR00003: copper ion binding protein 128 189 IPR006122 GO:0005507
Gma05g01341 994 Gene3D - 416 538 - -
Gma05g01341 994 MobiDBLite consensus disorder prediction 1 16 - -
Gma05g01341 994 CDD HMA 45 108 IPR006121 GO:0046872
Gma05g01341 994 PANTHER HEAVY METAL P-TYPE ATPASE 3 987 - -
Gma05g01341 994 Gene3D - 749 799 IPR023299 GO:0000166
Gma05g01341 994 Gene3D - 655 748 IPR023299 GO:0000166
Gma05g01341 994 PRINTS H+-transporting ATPase (proton pump) signature 840 856 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma05g01341 994 PRINTS H+-transporting ATPase (proton pump) signature 868 884 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma05g01341 994 PRINTS H+-transporting ATPase (proton pump) signature 899 924 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma05g01341 994 ProSiteProfiles Heavy-metal-associated domain profile. 200 258 IPR006121 GO:0046872
Gma05g01341 994 CDD HMA 128 189 IPR006121 GO:0046872
Gma05g01341 994 SUPERFAMILY HMA, heavy metal-associated domain 38 112 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01341 Gma-Chr5 35095099 35100473 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01341 05 35095099 35100473 Gma08g00819 08 6739768 6744914 GST