Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01336 ATGAATTGCAGTGAGGCAGCATCAGGAGGAGACATGAGTGTGAAACCTGCTGCATGGCTTGAGAGGCTTATGGCTGAGACATTCTTTGGTGGTTGTGGGGTCCATCAGAATCACAAGAAGAACGAGAAGAACGTCTTTTGCTTGCACTGTTGCCTTAGCATCTGCCCCCACTGCCTCCCTTCTCACCGCTCCCATTCCCTTCTCCAGGTGAGAAGGTATGTTTACCATGACGTGGTTCGATTGGGTGATCTGGAAAACCTCGTCGATTGTTCCAATATTCAGCCATATACCATTAACGGTGCGAAAGTGATATTCTTAAATCAGAGGCCACAATCAAGGTCATGCAAAGGCACTGCCAATTCTTGCTGCACTTGTGACAGGATTCTTCAGGAGCCCTTTCGCTTCTGTTCTCTGTCATGCAAGTTGGAGGGTCAAATAAGAGTTGATTGCTATACCCAATTTGTCCCCACTTCCTCCTGCTCGAATACTGAGGCTACCAGTAGCAGCATTGCCAACAACAACAACAACAAGACCAATGGCTTCTTCCTCTCTCTTGGAAGCAGGAGAAAGGGGGCTCCCCATAGAGCTCCACTCTCCTAG 600 0.485 MNCSEAASGGDMSVKPAAWLERLMAETFFGGCGVHQNHKKNEKNVFCLHCCLSICPHCLPSHRSHSLLQVRRYVYHDVVRLGDLENLVDCSNIQPYTINGAKVIFLNQRPQSRSCKGTANSCCTCDRILQEPFRFCSLSCKLEGQIRVDCYTQFVPTSSCSNTEATSSSIANNNNNKTNGFFLSLGSRRKGAPHRAPLS 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01336 199 Pfam PLATZ transcription factor 71 142 IPR006734 -
Gma05g01336 199 ProSiteProfiles Zinc finger B-box type profile. 32 70 IPR000315 GO:0008270
Gma05g01336 199 PANTHER OS02G0172800 PROTEIN 12 143 - -
Gma05g01336 199 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 12 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01336 Gma-Chr5 35042940 35047628 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Gma05g01336 PLATZ 5.4e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01336 05 35042940 35047628 Gma08g00814 08 6710283 6714661 GST