Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01334 ATGAGGGAGCCATCGTCGGTGGGATTCGAAGGCAACGGCGCCGTTTCTTCGCCGCCGCAAGCTCTCCTCGAGAGACTGAAAGACTACGGTCAAGAAGACGCTTTCGCCCTCTGGTACGAGCTCTCTTACGAGGAACGCGAGTTTCTCATCAAGGACATTGAGAGTTTAGATCTTTCGAGAATTGACCGGATTATTCGGTGCTCGCTGCGATCTCAAGGACTGCCGGCGGCGGCCATTGAGCCTGTGCCGGAGAGCAGTGTGTCGACGGTGGAGGAGAGAAGCCAAGAGGATCGAGAGAGATGGTGGAAAATGGGATTGAAGGCCATTTCTGATGGCAAATTAGCTGTGTTGCTTTTATCTGGTGGCCAGGGGACTCGACTTGGAAGTTCAGATCCAAAAGGATGTTTCAATATTGGACTTCCATCTGGAAAATCACTTTTTCAACTTCAAGCTGAGAGGATTTTGTGTGCACAGAGACTAGCTGCTCAAGCTACAAATGAGAATTCTGCTTCTTCAGTGCAAATACACTGGTACATCATGACCAGTCCATTCACTGATGAGGCAACACGCAAATTCTTTGAAAGTCATAAATTTTTTGGTCTCGAGGCAGAACAGGTTACCTTTTTCCAGCAAGGAACAATCCCTTGTGTTTCCAAGGATGGTAGATTTATTATGGAGACTCCATACAGGGTAGCAAAGGCTCCTGATGGGAATGGTGGAGTGTATTCAGCTCTGAAATCTACCAAATTATTGGAGGATATGGCCTCAAAAGGAATTAAGTATATTGATTGCTATGGAGTTGACAATGCACTAGTTCGAGTTGCCGATCCAACTTTTTTAGGTTACTTCATTGATAAAGGTGTTGCTGCTGCTGCAAAAGTTGTCCGCAAGGCATATCCACAAGAAAAGGTTGGTGTGTTTGTAAGACGAGGTAAAGGTGGTCCTCTTACCGTAGTGGAATACAGTGAGTTGGACCAGTCACTAGCTTCTGCAGTCAATCAAGCAACTGGCCGTCTTCGTTTTTGTTGGAGTAATGTCTGCTTACACATGTTCACTCTGGATTTTCTGAATCAAGTGGCAAATGGCCTTGAAAAAGACAGCATTTATCATCTTGCAGAGAAGAAAATACCTTCCATACATGGATATACAATGGGATTAAAACTTGAACAGTTTATATTTGATGCATTTCCATATGCTCCTACAACTGCACTTTTTGAGGTGTTACGGGAGGAGGAATTTGCACCAGTGAAAAATGCAAATGGATCCAATGTTGACACTCCAGACAGTGCGAAACTACTTGTTCTTCGACTCCATACTCGTTGGGTAGTTGCTGCAGGTGGCTTCTTAACACATTCAGTGCCCTTATATGCAACAGGTGTTGAAGTGTCACCACTCTGTTCACCTTCTAATTCTCTACTCTCTCACTTCTTTCTATCACATTTTACTTGCAAGATGGCAGCGTCATCAGCATGCCTTGTAGGGAATGGTTTATCTACACGGGGTAATAGAATAACTCTCAAGAAGGACTTCAATGGAAGATATCTCTACTCACCTTGGAGACTTTCATCATTGAACAATAAGGCATCAGAAGCATTTTCCATAAAGTCTTCCTTGGAGCAAAGGCAACAACAAGAAGGGAGAAGGGGGTTTCTAAAACTGTTGCTTGGAAATGTGGGAGTTGGTTTGCCTGCACTATTGGCAAGTGGCAAAGCTTATGCTGATGAACAAGGGGTTTCCTCCTCCAGAATGTCTTACTCCAGGTTTCTGGAGTATTTGGACAAGGACAGAGTTAAAAAAGTGGATCTGTATGACAATGGAAACACTGCTGTTGTTGAGGCTGTTTCTCCCGAGTTGGGGAATCGGTTGCAGTATGTTAGAGTTCAACTCCCTGGACTTAACCAAGAGCTCCTTCAGAAATTCAGGGAAAAGAATATTGACTTTGCAGCTCATAGTCCCCAAGAAGAGTCAGGTTCTCTTTTAGCTAACCTGATTGGGAATCTGGCTTTCCCTTTGATCTTGATTGGAGGATTGTTCCTTCTCTCGAGACGATCCGGAGGGATGGGAGGTCCTGGTGGGCCCGGATTTCCTCTTGCTTTTGGTCAATCCAAAGCCAAGTTTCAAATGGAACCGAACACCGGAGTGACATTTGATGATGTTGCTGGGGTGGATGAAGCCAAGCAGGACTTTATGGAGGTTGTGGAGTTTCTAAAGAAGCCTGAGAGGTTCACTGCTGTTGGGGCTCGCATACCGAAAGGAGTTCTTCTTGTTGGTCCTCCAGGAACTGGGAAGACACTGTTAGCCAAGGCTATTGCTGGTGAAGCTGGTGTTCCATTTTTCTCAATATCAGGTTCTGAGTTTGTTGAGATGTTTGTTGGTGTTGGTGCTTCTCGTGTTCGTGATTTGTTCAAGAAGGCCAAAGAGAATGCCCCTTGCATTGTCTTTGTTGATGAAATTGATGCTGTTGGAAGACAAAGAGGGACTGGAATTGGTGGTGGGAATGATGAAAGAGAGCAGACCCTCAACCAACTTTTGACAGAAATGGATGGGTTTGAGGGTAACACTGGTATCATTGTCGTTGCAGCAACTAACAGGGCTGACATTCTTGACTCTGCCTTATTGAGACCGGGTCGGTTTGATAGACAGGTGACAGTTGATGTTCCAGATATAAGGGGAAGGACTGAAATCCTAAAGGTTCATGCTAGCAACAAAAAGTTTGATGCTGATGTTTCTCTTGAAGTGATTGCGATGAGAACGCCTGGCTTTAGTGGAGCTGATCTTGCGAATCTCTTGAATGAAGCTGCTATATTAGCTGGTCGCCGGGGAAAGACAGGTATTTCATCTAAAGAAATCGATGATTCTATTGATAGGATTGTGGCTGGAATGGAAGGAACAGTTATGACAGATGGGAAGAGCAAAAGCTTAGTGGCATATCATGAAGTTGGGCATGCTATTTGTGGAACTTTGACTCCTGGTCATGATGCTGTGCAAAAGGTAACACTAGTTCCTCGTGGTCAAGCTCGGGGTCTTACATGGTTCATTCCTAATGATGATCCAACTCTGATCTCCAAACAACAACTCTTTGCAAGAATTGTTGGAGGACTAGGTGGAAGGGCTGCAGAAGAAATTATTTTTGGTGAGCCTGAAGTTACAACTGGAGCAGCTGGTGATTTGCAGCAAATCACCGGTTTGGCAAAACAGATGGTAACCACATTTGGAATGTCTGATATTGGTCCTTGGTCACTTATGGAAGCATCAGCACAAAGTGGGGATGTCATCATGAGAATGATGGCAAGGAACTCAATGTCAGAGAGACTTGCAGAAGACATCGATGCTGCCATCAAGAGGATCTCAGATGAAGCATATGAAATTGCACTAGACCATATAAGGAACAACCGTGAGGCGATTGACAAGATTGTCGAAGTCCTTCTGGAGAAGGAGACACTGACCGGAGATGAATTCCGTGCTATATTGTCTGAGTTTGCTGAAATTCCAGTTGAAAACCGTGTCCCTCCTTCAACTCCAGTACCAGCCACTGTTTGA 3540 0.4477 MREPSSVGFEGNGAVSSPPQALLERLKDYGQEDAFALWYELSYEEREFLIKDIESLDLSRIDRIIRCSLRSQGLPAAAIEPVPESSVSTVEERSQEDRERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCFNIGLPSGKSLFQLQAERILCAQRLAAQATNENSASSVQIHWYIMTSPFTDEATRKFFESHKFFGLEAEQVTFFQQGTIPCVSKDGRFIMETPYRVAKAPDGNGGVYSALKSTKLLEDMASKGIKYIDCYGVDNALVRVADPTFLGYFIDKGVAAAAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDQSLASAVNQATGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSIYHLAEKKIPSIHGYTMGLKLEQFIFDAFPYAPTTALFEVLREEEFAPVKNANGSNVDTPDSAKLLVLRLHTRWVVAAGGFLTHSVPLYATGVEVSPLCSPSNSLLSHFFLSHFTCKMAASSACLVGNGLSTRGNRITLKKDFNGRYLYSPWRLSSLNNKASEAFSIKSSLEQRQQQEGRRGFLKLLLGNVGVGLPALLASGKAYADEQGVSSSRMSYSRFLEYLDKDRVKKVDLYDNGNTAVVEAVSPELGNRLQYVRVQLPGLNQELLQKFREKNIDFAAHSPQEESGSLLANLIGNLAFPLILIGGLFLLSRRSGGMGGPGGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHASNKKFDADVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGKTGISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGHAICGTLTPGHDAVQKVTLVPRGQARGLTWFIPNDDPTLISKQQLFARIVGGLGGRAAEEIIFGEPEVTTGAAGDLQQITGLAKQMVTTFGMSDIGPWSLMEASAQSGDVIMRMMARNSMSERLAEDIDAAIKRISDEAYEIALDHIRNNREAIDKIVEVLLEKETLTGDEFRAILSEFAEIPVENRVPPSTPVPATV 1179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01334 1179 Pfam FtsH Extracellular 574 651 IPR011546 GO:0004176|GO:0004222|GO:0005524|GO:0008270|GO:0016021
Gma05g01334 1179 Pfam Peptidase family M41 967 1156 IPR000642 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Gma05g01334 1179 SMART AAA_5 749 888 IPR003593 -
Gma05g01334 1179 Hamap ATP-dependent zinc metalloprotease FtsH [ftsH]. 46 1172 IPR005936 GO:0004176|GO:0004222|GO:0016020
Gma05g01334 1179 SUPERFAMILY FtsH protease domain-like 968 1165 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Gma05g01334 1179 TIGRFAM FtsH_fam: ATP-dependent metallopeptidase HflB 664 1157 IPR005936 GO:0004176|GO:0004222|GO:0016020
Gma05g01334 1179 Gene3D - 704 886 IPR027417 -
Gma05g01334 1179 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 2, CHLOROPLASTIC 478 1169 - -
Gma05g01334 1179 Pfam UTP--glucose-1-phosphate uridylyltransferase 64 448 IPR002618 GO:0070569
Gma05g01334 1179 CDD AAA 728 885 - -
Gma05g01334 1179 ProSitePatterns AAA-protein family signature. 856 874 IPR003960 GO:0005524|GO:0016887
Gma05g01334 1179 PANTHER METALLOPROTEASE M41 FTSH 478 1169 - -
Gma05g01334 1179 Gene3D Peptidase M41 966 1162 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Gma05g01334 1179 CDD UDPGlcNAc_PPase 99 420 - -
Gma05g01334 1179 Gene3D - 887 965 - -
Gma05g01334 1179 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 15 492 IPR029044 -
Gma05g01334 1179 SUPERFAMILY Nucleotide-diphospho-sugar transferases 21 469 IPR029044 -
Gma05g01334 1179 Gene3D - 578 657 - -
Gma05g01334 1179 Pfam ATPase family associated with various cellular activities (AAA) 753 884 IPR003959 GO:0005524|GO:0016887
Gma05g01334 1179 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 711 956 IPR027417 -
Gma05g01334 1179 Pfam AAA+ lid domain 908 951 IPR041569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01334 Gma-Chr5 35016760 35031479 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01334 05 35016760 35031479 Gma08g00812 08 6683505 6697696 GST