Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00250 ATGAAGAAACTCTCACTCTTACCCTCGGATTTGGACACTAAATGTTCCACTCCCTCGTTGATGAGCATGATGGGCTTTTTTGTCGCTTCCTTCGTCCTCTGCTCTGTGGTTTTCTCAGTCTCCATTGTTCTTCGAGACCCTCCCTCAGATGCCGCCCTGCACGAACCCTCGTCACTCGCACCCCTCTTGCAAATCACACAAACTCTACGAGATTTGGTCAATGAaacctctgattctgttgagctgcaacaagataaactgcttggtggccttctagctgatggatttgatgaaaaatcttgtctcagcaggtatcactttcacaaagggctatcagaaaagccttcttcttacctcatttctaggttaagaaaatatgaagctcagcacaaacaatgtggaccttacactgattcctataacaaaacagttgaacaacttaggtctggtggtcaatttactgagtcctcagagtgtaaatatgttgtatggatttcgtttagtggcttagggaataggattttgaccctagcttctgcttttctctatgctctcctcactaaccgtgttctactggttgaccctggagcggatatggttgatctcttttgtgagccatttccagattcTTCCTGGCTTCTTCCTAGTGACTTTCCTCTTAATGCTCAGTTTAATAATTTCAGTCAGAATTCTGATCATTGTTATGGGAAAATGCTGAAAAGTAAAGCAGTTACAGATTCCACTGTTGCATCTTTTGTCTACCTTCATATAGCCCATGATTATGAtgatcatgataagcttttcttctgcgatgaagaacaacgttttctccagatcgtgccatggttaataatgaaaacagataactactttgtcccttctgtattcttaatgccatcttttgagcaggaactgaatgatctcttcccaaataaggaaacagtgttccatttcttgagtaggtatctgttccaccctacaaacagtgtgtggggacttgtggtcagatactatcaagcttatttatctaaagctgatgaaagagtgggcatacaaattagagtgtttgacactgaacctggtccgtttcaacatgtattggatcagatcttagcttgtactttgaagaagaatattttgcctgatgttaaccaccagcaggatgctaccaattcatcaggaattcccaagtcaaaagcggtactgatgacatccttaaactctggttattttgaaaaggtgagagacatgtattgggaatatcctacggtgacgggagaagtggttggcgtttaccagccgagccacgaaggatatcaacaaacacagaagcagatgcacaaccaaaaagcttgggcagaaatgtatctcttaagcttaactgatgtgttggttactagctcatggtctacttttgggtatgtggctcaggggcttggaggtttaaaaccgtggattctgtacaaacctgagaatcgaacagccccagatcctccctgtcgacgtgccatgtcaatggagccgtgtttccatgctcctcccttctatgactgcaaGGCCAAGAGAGGAACTGACACAGGTGAACTTGTTCCATATGTAAGGCACTGTGAAGATATGAGCTGGGGCCTTAAGCTTGTGGACAGTGATAGTTATCGCTAG 1659 0.1302 MKKLSLLPSDLDTKCSTPSLMSMMGFFVASFVLCSVVFSVSIVLRDPPSDAALHEPSSLAPLLQITQTLRDLVNETSDSVELQQDKLLGGLLADGFDEKSCLSRYHFHKGLSEKPSSYLISRLRKYEAQHKQCGPYTDSYNKTVEQLRSGGQFTESSECKYVVWISFSGLGNRILTLASAFLYALLTNRVLLVDPGADMVDLFCEPFPDSSWLLPSDFPLNAQFNNFSQNSDHCYGKMLKSKAVTDSTVASFVYLHIAHDYDDHDKLFFCDEEQRFLQIVPWLIMKTDNYFVPSVFLMPSFEQELNDLFPNKETVFHFLSRYLFHPTNSVWGLVVRYYQAYLSKADERVGIQIRVFDTEPGPFQHVLDQILACTLKKNILPDVNHQQDATNSSGIPKSKAVLMTSLNSGYFEKVRDMYWEYPTVTGEVVGVYQPSHEGYQQTQKQMHNQKAWAEMYLLSLTDVLVTSSWSTFGYVAQGLGGLKPWILYKPENRTAPDPPCRRAMSMEPCFHAPPFYDCKAKRGTDTGELVPYVRHCEDMSWGLKLVDSDSYR 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00250 552 Pfam Xyloglucan fucosyltransferase 75 519 IPR004938 GO:0008107|GO:0016020|GO:0042546
Gma05g00250 552 Gene3D - 156 206 - -
Gma05g00250 552 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 26 551 - -
Gma05g00250 552 PANTHER FUCOSYLTRANSFERASE 2-RELATED 26 551 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00250 Gma-Chr5 2249546 2251615 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00250 11 546 Xyloglucan Fucosyltransferase1 AT2G03220 61.410 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00250 K13681 - gmx:100803305 1117.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00250 05 2249546 2251615 Gma05g00250 05 2249546 2251615 ECH