Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00126 ATGTATTCCTCAAATACCTCCCTCAACGGCAATGAACTAATCTCGTACCCTAACCAACCATTTTGCTTTAGGCCTTTTTCCTTTGAAAGCAACCCAACTAATTCTTCAAAAGAAGAAACCAATTCGAATTACGCCCTTCCTCTTCCTCCTCCTCCTCCTCTTTTGTCCTTTTTCCAATCTCCCTTTGACGAAAATATCTTCCAGGAACACCACCATGACTTCCTCCTACTTCACCACTCTCTAGCTGACTCTGGAGTACTCACCAAAAACCTTGACGTTGCGGCCGAAATCTCGCCAATTCCTTGCCCTGGAGAAGGCTCAATTGCGATGGAGCACACTCCAAGAAAGAGATCCAGCAAGAGAGATCGCCACAGCAAGATCAACACCGCACGGGGCCTCAGAGATCGAAGAATGAGGTTGTCCCTCGAAGTCGCGAAGCGGTTTTTTGGGTTGCAAGACATGCTAGGCTTTGACAAGGCCAGCAAAACCGTGGATTGGTTACTAAACCAAGCAAAGGGTGAAATCAAACAACTTGGAAGGGAAAAAACAAGTGTTGGTGGTGCGAAGAGTGCATCATCAACTTCGGAATGCGAAGGGGTGTCTAGCTTGGACGAGGTTGTAGTGAGTGGAGGAGTTAACGAGGAGCAAGAGAGGGAGACAGTACCAAACATGAAGAGAAGAACAAACAAGGTTTGTAGAAAGAGTGCATTCAATCCTATTGATAAGGAATCGAGGGAAAAGGCAAGAGAAAGGGCAAGAGAAAGAACAAGAGAGAAGATGAGAACTCGGAGAGTACTTGCTGATGCATCAAACCTGAACCGTTTGAGTTCTTGGAACCCCTTTGAAACGGTTGAAGACTCTGCGGGTACTACTCATCAAAGCCAAAGCGTGAACCATCCCTCCTTGGATGTGCACCTTCCTGAGGCTGATCAAGAACCAAGTTCTCACAACGCGAAGGAGCATTGGGGAGAGAACATGGCGCATGAAGATAATTCTTTGGCGATCATGAACAAGTGGAGCCCAACTATGATGTTCAATTCTCTTCACAACTCAGGAGTCCTTCAGGAACATCAATTTGCAGAATTTCAGTCCTTGGGCAAACCTTGGGAAGCCTACAGCAATCACATCTAA 1131 0.4642 MYSSNTSLNGNELISYPNQPFCFRPFSFESNPTNSSKEETNSNYALPLPPPPPLLSFFQSPFDENIFQEHHHDFLLLHHSLADSGVLTKNLDVAAEISPIPCPGEGSIAMEHTPRKRSSKRDRHSKINTARGLRDRRMRLSLEVAKRFFGLQDMLGFDKASKTVDWLLNQAKGEIKQLGREKTSVGGAKSASSTSECEGVSSLDEVVVSGGVNEEQERETVPNMKRRTNKVCRKSAFNPIDKESREKARERARERTREKMRTRRVLADASNLNRLSSWNPFETVEDSAGTTHQSQSVNHPSLDVHLPEADQEPSSHNAKEHWGENMAHEDNSLAIMNKWSPTMMFNSLHNSGVLQEHQFAEFQSLGKPWEAYSNHI 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00126 376 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 15 347 IPR005333 GO:0003700
Gma05g00126 376 MobiDBLite consensus disorder prediction 236 261 - -
Gma05g00126 376 MobiDBLite consensus disorder prediction 186 200 - -
Gma05g00126 376 MobiDBLite consensus disorder prediction 104 125 - -
Gma05g00126 376 MobiDBLite consensus disorder prediction 307 326 - -
Gma05g00126 376 ProSiteProfiles R domain profile. 242 259 IPR017888 -
Gma05g00126 376 MobiDBLite consensus disorder prediction 183 202 - -
Gma05g00126 376 ProSiteProfiles TCP domain profile. 120 178 IPR017887 -
Gma05g00126 376 Pfam TCP family transcription factor 119 262 IPR017887 -
Gma05g00126 376 PANTHER TRANSCRIPTION FACTOR TCP18 15 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00126 Gma-Chr5 1269972 1271469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00126 52 189 TCP Transcription Factor Family AT1G68800 42.683 6.94e-27 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gma05g00126 TCP 4.1e-45 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00126 05 1269972 1271469 Gma17g01138 17 9888355 9889863 ECH
Gma08g02386 08 23459544 23460769 Gma05g00126 05 1269972 1271469 ECH
Gma05g00126 05 1269972 1271469 Gma05g00126 05 1269972 1271469 ECH
Gma17g01138 17 9888355 9889863 Gma05g00126 05 1269972 1271469 GST