Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02290 ATGTTCCCACGCAGCTTTAACATTAGCGGCGGCGATGCGGGGCTTCCACAAATGTTGCATCCTCGTCACATGGTAACTCCAATGGAAGAACAACAACGTTCGAGGTGGAAACCCAGCGTCGAGGTTGCACCCAATTGCCCTCGCTGCGCCTCCACCAACACCAAATTCTGTTACTACAACAACTACAGCTTGTCCCAGCCGAGGTACTTCTGCAAAGGCTGCAGGCGCTACTGGACCAAAGGCGGCTCTCTCCGCAACGTCCCCGTCGGCGGTGGCTGCCGCAAGAACCGCCGTGGAAAGTCATCGTCGTCGTCGCGGCTACAACACCAAAGCCATCAACGCGCTTTTAGCTGTGAGAACACAGAGTCATCATCAGTAGGTGATTATGCCCAACAAAATAACAATGTGTCACGTGATATAGACATGGCTCTCGTGTTCGCCAAATTCTTGAACCCAAAACCAACTACTGGTGAGGATAACAATGGTTCACCTTCTTCCAACAATTACTTAACACCGGAAAGTGTAGAAATTGAGAATGATGCAGTGGTTCAGTCACAGAATAAGGCTTCATCGGATCCTGTTATTGTAGAGTCTGAGAATTTGAGTTTGGTTGAGATTGATGAGTTGGAGAGGTTATTAGGTGTGTGTGGTGATGAAGATGGTCTTTGGTCTGATGCTACCTTGTCGTCTTCGGTTACTTGGGAACCACCATTGAAGGAGTCGGAATACTCGATGCCGTTGAATGAGGATGATGGTGATCAATTGTTACCCATCATCATTTCTGCATCTACGATGAGCGACACTTGCTGGAGTAATTGGAGTTCCTTTGATCTTTCAACCATGGACGCGCTCTCATCAAGTCCTTCTTAA 870 0.4828 MFPRSFNISGGDAGLPQMLHPRHMVTPMEEQQRSRWKPSVEVAPNCPRCASTNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRGKSSSSSRLQHQSHQRAFSCENTESSSVGDYAQQNNNVSRDIDMALVFAKFLNPKPTTGEDNNGSPSSNNYLTPESVEIENDAVVQSQNKASSDPVIVESENLSLVEIDELERLLGVCGDEDGLWSDATLSSSVTWEPPLKESEYSMPLNEDDGDQLLPIIISASTMSDTCWSNWSSFDLSTMDALSSSPS 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02290 289 MobiDBLite consensus disorder prediction 89 124 - -
Gma04g02290 289 ProSitePatterns Zinc finger Dof-type signature. 46 82 IPR003851 GO:0003677|GO:0006355
Gma04g02290 289 ProSiteProfiles Zinc finger Dof-type profile. 44 98 IPR003851 GO:0003677|GO:0006355
Gma04g02290 289 PANTHER DOF ZINC FINGER PROTEIN DOF1.2 24 246 - -
Gma04g02290 289 Pfam Dof domain, zinc finger 44 98 IPR003851 GO:0003677|GO:0006355
Gma04g02290 289 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 24 246 IPR045174 GO:0003700|GO:0006355
Gma04g02290 289 MobiDBLite consensus disorder prediction 103 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02290 Gma-Chr4 53356819 53357688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02290 36 228 C2C2-Dof Transcription Factor Family AT3G52440 42.727 2.72e-44 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gma04g02290 zf-Dof 1.1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02290 - - gmx:778117 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02290 04 53356819 53357688 Gma04g02290 04 53356819 53357688 ECH
Gma04g02290 04 53356819 53357688 Gma06g01111 06 10398639 10399786 GST