Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02238 ATGGCCCTGTCAAGTCCTCACATACAAAGATTCCTCTTATGCAAGCTTCATAACCGCTCCACCGCTAAGAACATACACAGAAACAACTTTACCACCAGCAGCAGGAGCAGGTGCTGCTCTGCCATAGCCATTGATGCTCCATCGTCTTTGACCGAGGTGCCCGGCATAAGATGGGGGTCCATAGCCTTGCAGGGTCTCCGTGAAGAGATGGAAGATGATATTATTGTTCGGCCCGAGGGCCTTCAGGGCTTCTCTTTTGCAGCTGTCTTTGATGGCCATGGAGGCTTTTCTTCGGTTGAGTTCCTCAGGGATGAGCTGTACAAGGAGTGTGTTAATGCTTTACAAGGTGGGTTACTATTAGTCGAGAAAGATTTCAAAGCCATTAAAGGGGCATTACAGGAGGCATTTCTCAAGGTTGACACAAGGTTATTAAAACGGCTTGAAATGAATGGAGAGGAGGATGAATCAGGTGCTACAGCAACTACCGTGTTCATTGGAGATGATGAGCTGCTAATTTCACATATTGGTGACTCAACTGTGGTTCTATGCAGATCTGGAAAAGCAGAAGTTCTGACTAGTCCTCACCGTCCAATTGGGAGCAACAAGACTTCTCTTGATGAAATTAGAAGAGTCAGAGAAGCAGGTGGATGGATTAGCAATGGTAGAATTTGTGGAGACATTGCTGTATCTCGTGCATTTGGGGACGTGCGATTCAAAACAAAGAAGAATGAGATGCTGCAAAAAGGAGTTCAGGAAGGAAGATGGTCGGCAAAGTTCATTTCTCGTGTACAGCTCAACAATGACTTGGTTGTTGCATACCCTGATATTTATCAAGTAGCTCTTGGCTCAGATGCAGAATTTGTAGTATTAGCATCCGATGGCTTATGGGATTACATGGGCAGCTCCGAAGCAGTTTCTATAGTGAGGGATCAACTGCGAAAACACGGAAACATTCAGCAAGCATGTGAAGCACTTGCAGAAGCCGCTTTGGATCGACGTACACAGGATAATGTCAGCATTATAATTGCTGATTTAGGGAGGACAGACTGGAAGAATGCGCCACTGGAGCGACAAAATACTATACTTGAGCTGGTCCAAGCTCTTGCAACCATTGGAATTGTGTCCATTGGAATCTGGTTTTCATCACAGCTTTCTTTATAG 1161 0.4531 MALSSPHIQRFLLCKLHNRSTAKNIHRNNFTTSSRSRCCSAIAIDAPSSLTEVPGIRWGSIALQGLREEMEDDIIVRPEGLQGFSFAAVFDGHGGFSSVEFLRDELYKECVNALQGGLLLVEKDFKAIKGALQEAFLKVDTRLLKRLEMNGEEDESGATATTVFIGDDELLISHIGDSTVVLCRSGKAEVLTSPHRPIGSNKTSLDEIRRVREAGGWISNGRICGDIAVSRAFGDVRFKTKKNEMLQKGVQEGRWSAKFISRVQLNNDLVVAYPDIYQVALGSDAEFVVLASDGLWDYMGSSEAVSIVRDQLRKHGNIQQACEALAEAALDRRTQDNVSIIIADLGRTDWKNAPLERQNTILELVQALATIGIVSIGIWFSSQLSL 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02238 386 Pfam Protein phosphatase 2C 59 338 IPR001932 -
Gma04g02238 386 CDD PP2Cc 56 345 IPR001932 -
Gma04g02238 386 SMART PP2C_4 47 343 IPR001932 -
Gma04g02238 386 ProSitePatterns PPM-type phosphatase domain signature. 86 94 IPR000222 GO:0043169
Gma04g02238 386 PANTHER PROTEIN PHOSPHATASE 2C 57 5 382 - -
Gma04g02238 386 Gene3D - 56 352 IPR036457 -
Gma04g02238 386 ProSiteProfiles PPM-type phosphatase domain profile. 57 345 IPR001932 -
Gma04g02238 386 PANTHER PROTEIN PHOSPHATASE 2C 5 382 IPR015655 GO:0004722|GO:0006470
Gma04g02238 386 SUPERFAMILY PP2C-like 49 346 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02238 Gma-Chr4 52804967 52808967 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02238 04 52804967 52808967 Gma06g01174 06 11048091 11052451 GST
Gma04g02238 04 52804967 52808967 Gma17g02359 17 41629007 41631097 PCT