Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01634 ATGCAGGAAAATAAGGATCCAGCAATTAAGCTCTTCGGCCAGAAGATTGCCTTCCCCGGAGAAGCCGATTCTCAAGCCATTGCCGGCGGCGAAACCGACTGGCCGCCGGCGATGGACGTCGACAAGGACGAAGAAGACTTTGGTATTGGTAACCCAGACAAAGATGAGAAAGACAAGGATCCTCGAGCTGAAAAAGTTAGTGAGAAAACGAAAGAAGCTGATCCTCCTCCAGATGCTGCAGACTCTAAGACGTCAGAGGGTATTCAGAACCCAAATACACCTTCCATAGACGAAGAATCTGCAAAGTCAAAAAACGACAAGTCAGAGAACGATCAACAAGAAAACAACAACAACAAAACACTGAAGAAGCCAGACAAAATTCTGCCGTGTCCGCGCTGCAACAGCATGGACACCAAGTTCTGCTACTACAACAACTACAACGTTAACCAACCCCGCTATTTCTGCAAGGCGTGCCAAAGGTACTGGACCGCTGGCGGCACCATGCGGAACGTGCCGGTGGGAGCGGGGCGAAGAAAGAACAAGAACTCAGCCTCGCACTACCGCCACATCACAATCTCTGAAGCTCTTCAAGCGGCCAGAATCGATGCCCCCAACGGAACTCATCTTTTGAAACAAAATGGGAGAGTCCTCAGCTTCGGATTAGACCCTCCAATTTGTGATTCCATGGCATCAATCCTTAACCTCACAGCAGAGAAAAAGGGTACTCTTAACAACAACACAAGAAACGGATTTCACACAATTGAGGATCAGAGAAACAAAGACAACCACAACAATAACAATAACAACGGTGATGACTGCTCAAGTGCATCTTCAATTACTGTTTCCAATGAGGAAAGTGGGAAAAGCACGTCTCAAGAATCGATTATGGTGCCCAACAGCAACGGTTTCATCCACCAGGTTCCATGCATTTCCACTCTCCCTTGGCCTTATCCTTTTCCCTCAGCAGCACCTGCTATGTGCCCTCCAGGGTTTCCCATGTCATTCTACCCTGCAGCATTTTGGAACATTCCATGGTTTCCCTCACAACACTCACACCATTCTGCTCCTACTCCAAGGTCTCCCAGTTCCGGTCCTAATTCTCCAACACTAGGGAAACACTCCCGCGTCGTCGCGGAAAAACAAGACCATTTGCAAGAAGAATCACCCTCCAGGCAGAGAAACGGGTCTGTTCTGGTCCCGAAAACATTGAGAATTGATGACCCAAGTGAGGCTGCAAAGAGTTCCATATGGGCAACTTTAGGGATCAAGAATGAGTGTGTCACTGGTGGTGGCATGTTCAAGGGATTCCAATCAAAGAAAGATGAGAAAGACCATGTTGTTGAAGCCTCTCCAGTGTTGAGGGCTAACCCTGCAGCCTTGTCTAGATCCCTTAACTTTCATGAGAACTCTTGA 1413 0.4805 MQENKDPAIKLFGQKIAFPGEADSQAIAGGETDWPPAMDVDKDEEDFGIGNPDKDEKDKDPRAEKVSEKTKEADPPPDAADSKTSEGIQNPNTPSIDEESAKSKNDKSENDQQENNNNKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRYFCKACQRYWTAGGTMRNVPVGAGRRKNKNSASHYRHITISEALQAARIDAPNGTHLLKQNGRVLSFGLDPPICDSMASILNLTAEKKGTLNNNTRNGFHTIEDQRNKDNHNNNNNNGDDCSSASSITVSNEESGKSTSQESIMVPNSNGFIHQVPCISTLPWPYPFPSAAPAMCPPGFPMSFYPAAFWNIPWFPSQHSHHSAPTPRSPSSGPNSPTLGKHSRVVAEKQDHLQEESPSRQRNGSVLVPKTLRIDDPSEAAKSSIWATLGIKNECVTGGGMFKGFQSKKDEKDHVVEASPVLRANPAALSRSLNFHENS 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01634 470 MobiDBLite consensus disorder prediction 263 295 - -
Gma04g01634 470 MobiDBLite consensus disorder prediction 349 370 - -
Gma04g01634 470 MobiDBLite consensus disorder prediction 375 389 - -
Gma04g01634 470 MobiDBLite consensus disorder prediction 349 402 - -
Gma04g01634 470 MobiDBLite consensus disorder prediction 242 295 - -
Gma04g01634 470 Coils Coil 96 116 - -
Gma04g01634 470 ProSitePatterns Zinc finger Dof-type signature. 130 166 IPR003851 GO:0003677|GO:0006355
Gma04g01634 470 MobiDBLite consensus disorder prediction 1 128 - -
Gma04g01634 470 PANTHER CYCLIC DOF FACTOR 2 1 469 IPR045174 GO:0003700|GO:0006355
Gma04g01634 470 MobiDBLite consensus disorder prediction 99 121 - -
Gma04g01634 470 ProSiteProfiles Zinc finger Dof-type profile. 128 182 IPR003851 GO:0003677|GO:0006355
Gma04g01634 470 MobiDBLite consensus disorder prediction 83 98 - -
Gma04g01634 470 MobiDBLite consensus disorder prediction 41 79 - -
Gma04g01634 470 Pfam Dof domain, zinc finger 125 182 IPR003851 GO:0003677|GO:0006355
Gma04g01634 470 PANTHER CYCLIC DOF FACTOR 1 1 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01634 Gma-Chr4 44438739 44441671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01634 1 468 C2C2-Dof Transcription Factor Family AT3G47500 48.980 2.32e-124 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gma04g01634 zf-Dof 2.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01634 - - gmx:100803454 959.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01750 06 17801036 17804323 Gma04g01634 04 44438739 44441671 ECH
Gma19g00205 19 2685498 2688716 Gma04g01634 04 44438739 44441671 ECH
Gma20g00335 20 4942519 4945787 Gma04g01634 04 44438739 44441671 ECH
Gma01g00454 01 5866252 5870143 Gma04g01634 04 44438739 44441671 ECH
Gma04g01634 04 44438739 44441671 Gma04g01634 04 44438739 44441671 ECH