Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01620 ATGAAGAGGCACTGGCGCAACTGGAGCCACGACGACGAAGGCGAAGGCCTCCCAGATTCGGATTCCGACACGCGCTCCAGCCGGAGATTCTCTCTCACGCGCCTCATGGCAATCTTTCTCTTCTCTCTCTTCCTCTTCTCCCTCATCTTCCTTCTCCCACATCCTCCCATCCAATCAGCTTCAACAGCAAAGACTCTGCACCAATTCAAGCAAACTCAACAAGGTAACGTTGCTGATTCTGTTGAGTTGCACAAAGATAAACTACTTGGTGGCCTTATAGCAGATGGATTTGATGAACAATCATGTCTCAGCAGATCTGAGGTCTGGTCATATCGAGTTCTATTGGTTGATCCTGGAGTTGATATGGTGGATCTTTTTTGCGAACCGTTGCCACATGTTTCCTGGTTTCTCCCTCCTGATTTCCCTCTCAACAGTCAATTTCCCAGTTTTGATCAGAAATCTGATCAATGTTATGGGAAAATGCTGAAAAATAAATCAGCTACAAACTCCGTTGTTCCCTCTTTTGTCTACCTTCATCTAGCACATGACTATGACGATCAGGACAAGCTTTTCTTCTGTGATGATGACCAAGCTTTTCTTCAGAAAGTGCCATGGTTAGTGGTGAGAACAGATAACTACTTTGCCCCATCTCTATTCTTGATGCCGTCTTTTGAGAAGCAACTGAGTGATCTCTTTCCAAACAAGGAAACAGTTTTCCATTTCTTGGGTAGATATCTGTTCCACCCAACCAACAAAGTATGGGGACTTGTTAGCAGATACTATCAAGCTTATTTAGCTGACGTTGATGAAAGAGTAGGCATCCAAATAAGAGTGTTTGATACTAGAACTGGACCATTTCAACATGTGTTGGATCAGATCTTAGCTTGCACTTTGAAGGAGAATCTTTTGCCTGATGTTAACCAAAAGGGGGATATTGTTAATTCACCAGGAAAGCCGAAATCAAAAGCTGTGCTGATGACATCCTTGAGCTACGGTTATTTTGAAAAGGTGAGAGACATGTTTTGGGAACACCCAACTGTGACAGGAGAAGTTGTTGGCATTTACCAGCCAAGCCATGAAGGGTATCAACAAACAGAGAAGAAGATGCACAACCAAAAAGCTTGGGCAGAAATTTACCTCTTGAGCTTGATGGATATGTTGGTCACGAGCTCGTGGTCTACTTTCGGCTACGTGGCGCAGGGGCTTGGAGGGTTGAAACCGTGGATACTGTACAAGCCCGAGAATGGAACAGCTCCTGATCCTCCTTGTCAACGTGCCATGTCGATGGAGCCATGCTTCCATGCTCCTCCCTTCTATGATTGTAAGGCTAAGAGAGGAACTGATACTGGTGCACTTGTTCCACATGTAAGGCACTGTGAGGATATGAGCTGGGGTCTTAAGCTTGTAGACAGTAATAGTTGGCAATAA 1428 0.4482 MKRHWRNWSHDDEGEGLPDSDSDTRSSRRFSLTRLMAIFLFSLFLFSLIFLLPHPPIQSASTAKTLHQFKQTQQGNVADSVELHKDKLLGGLIADGFDEQSCLSRSEVWSYRVLLVDPGVDMVDLFCEPLPHVSWFLPPDFPLNSQFPSFDQKSDQCYGKMLKNKSATNSVVPSFVYLHLAHDYDDQDKLFFCDDDQAFLQKVPWLVVRTDNYFAPSLFLMPSFEKQLSDLFPNKETVFHFLGRYLFHPTNKVWGLVSRYYQAYLADVDERVGIQIRVFDTRTGPFQHVLDQILACTLKENLLPDVNQKGDIVNSPGKPKSKAVLMTSLSYGYFEKVRDMFWEHPTVTGEVVGIYQPSHEGYQQTEKKMHNQKAWAEIYLLSLMDMLVTSSWSTFGYVAQGLGGLKPWILYKPENGTAPDPPCQRAMSMEPCFHAPPFYDCKAKRGTDTGALVPHVRHCEDMSWGLKLVDSNSWQ 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01620 475 MobiDBLite consensus disorder prediction 1 24 - -
Gma04g01620 475 Pfam Xyloglucan fucosyltransferase 111 442 IPR004938 GO:0008107|GO:0016020|GO:0042546
Gma04g01620 475 PANTHER FUCOSYLTRANSFERASE 2-RELATED 111 475 IPR004938 GO:0008107|GO:0016020|GO:0042546
Gma04g01620 475 PANTHER FUCOSYLTRANSFERASE 2-RELATED 1 107 IPR004938 GO:0008107|GO:0016020|GO:0042546
Gma04g01620 475 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 111 475 - -
Gma04g01620 475 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 1 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01620 Gma-Chr4 44078653 44081236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01620 112 469 Xyloglucan Fucosyltransferase1 AT2G03220 67.039 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01620 K13681 - gmx:100800258 763.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01620 04 44078653 44081236 Gma04g01620 04 44078653 44081236 ECH