Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01228 ATGGGTGCAACTGAAGATCTTGTGAACAGCACACAGGGTGCAGCAGAATGTCAGGAAAACCGCACCACAGGTCCTTCAGAAAATCCAATAAAGGACAACACCAGTAGTACTTCAGAAAATCTTGTACAGTACAAAGCACTAGATGCAGAAAATCCTGTAAGTGATCAACAAGGTGGTGCAGAAATTCCTGAAACTGGAGGTGCTGAAAATCCTGCAAGTGACCAAAAAAATGTGGAACAAATTCCTGCAAGTGAGCAAGTGGGTATTGCAgaaaatatggtaaatgaccaagcaggtggtgcagaagatcccacaaaggaccgaacagcaggtggtgcagaaaatcctttaaatgacctaatatttcttgcacaaaattctgaaagtgaacaagcaggtagtgtggaaaatctgttaagcgaccaagcaggtgttgcagaagatcacacaaagaaccgtgcagcaggtagtgccgaaaatccttcaaatgacctaatagatcttgcacaaaatcctgaaagtgaacaagcaggtagtgaggaaaatctCCAAAGAAATGGTGTTGAAACCCCTGTAAGCAACAAAGCAGATCGCCTCCCAGAAGAAGCAAAGGAGATACTGAAATCATTGGCAAGTAAATGGGAGGATGTACTTGATGCAAATGCATTGCAGGTGATCCCTCTCAAAGGGGCAATGACGAATGAGGTATTCCAGATAAAGTGGCCAACTATGACAGGGGAATTGTCACGAAAGGTTCTTGTTAGAATGTATGGTGAGGGTGTGGACGTGTTCTTTGATAGGGATAATGAGATCCACACATTTGAATTCATGTCAAAGAATGGGCAAGGTCCTCGTCTACTAGGACGATTTACGAATGGCCGTGTTGAAGAGTTTATCCATGCACGGACATTATCAGCATCTGATCTACGTGATCCATCTATTTCTGCTCTTATAGCAGCCAAAATGAAGGAGTTCCATGATCTAGATATGCCTGGTGAAAAGAAAGTCCATCTTTGGGATAGATTGCGAAATTGGCTTAGTGAAGCCAAACGTTTATCGTCCCCTAAAGAAGTTGAAGCTTTTTATTTGGATACAATCGACAAAGAAATCTCTATTTTGGAAAAGGAACTATCAGGCTCTCACCAACAAATAAAATTTTGCCACAATGATTTACAATATGGTAACATAATGCTTGATGAAGAGACAAATTCTGTGACCATCATAGACTATGAATATGCTAGTTATAATCCTGTAGCATTTGATATAGCAAACCACTTCTGTGAGATGGCTGCTAACTATCATACAGAAGAGCCTCATATCCTTGACTACAATAAATATCCTGATTTTGAGGAGCGTCAAAGATTTGTGCAGGCATATCTGAGTACCTCCGGTGAGCAGCCTAGTGACAGTGAAGTGGAGCAGCTACTTCAAGAAATTGAGAAGTATACACTTGCAAATCATCTATTCTGGGGCGTTTGGGGAATAATTTCGGCACAAGTAAACACTATCGACTTTGACTACAAGGAGTATGCTAAACAGAGATTTCAAGAGTACTGGGCAAGGAAACCTTATCTTCTAATAAACTCTGAAGCGCCTTCTCCTTATAATGTGCCTGAGGGTACAGgagagctagcttcagcagtgcccactaaatcgaagaactctggtatctttaggaaGATGAAGAGAGTTTTGGGTCTCGGCTTGTTCAGGTCTAAGAGCTAG 1725 0.3345 MGATEDLVNSTQGAAECQENRTTGPSENPIKDNTSSTSENLVQYKALDAENPVSDQQGGAEIPETGGAENPASDQKNVEQIPASEQVGIAENMVNDQAGGAEDPTKDRTAGGAENPLNDLIFLAQNSESEQAGSVENLLSDQAGVAEDHTKNRAAGSAENPSNDLIDLAQNPESEQAGSEENLQRNGVETPVSNKADRLPEEAKEILKSLASKWEDVLDANALQVIPLKGAMTNEVFQIKWPTMTGELSRKVLVRMYGEGVDVFFDRDNEIHTFEFMSKNGQGPRLLGRFTNGRVEEFIHARTLSASDLRDPSISALIAAKMKEFHDLDMPGEKKVHLWDRLRNWLSEAKRLSSPKEVEAFYLDTIDKEISILEKELSGSHQQIKFCHNDLQYGNIMLDEETNSVTIIDYEYASYNPVAFDIANHFCEMAANYHTEEPHILDYNKYPDFEERQRFVQAYLSTSGEQPSDSEVEQLLQEIEKYTLANHLFWGVWGIISAQVNTIDFDYKEYAKQRFQEYWARKPYLLINSEAPSPYNVPEGTGELASAVPTKSKNSGIFRKMKRVLGLGLFRSKS 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01228 574 Gene3D Phosphorylase Kinase; domain 1 210 298 - -
Gma04g01228 574 MobiDBLite consensus disorder prediction 1 116 - -
Gma04g01228 574 PANTHER CHOLINE/ETHANOALAMINE KINASE 188 534 - -
Gma04g01228 574 MobiDBLite consensus disorder prediction 173 191 - -
Gma04g01228 574 CDD ETNK_euk 223 521 - -
Gma04g01228 574 PANTHER CHOLINE KINASE 2-RELATED 188 534 - -
Gma04g01228 574 Pfam Choline/ethanolamine kinase 250 450 - -
Gma04g01228 574 Gene3D - 258 519 - -
Gma04g01228 574 MobiDBLite consensus disorder prediction 173 200 - -
Gma04g01228 574 Pfam Choline kinase N terminus 199 222 IPR007521 GO:0016773
Gma04g01228 574 SUPERFAMILY Protein kinase-like (PK-like) 190 526 IPR011009 -
Gma04g01228 574 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01228 Gma-Chr4 18360615 18366120 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01228 183 530 Acyl Lipid Metabolism Gene Families AT1G74320 67.529 0.0 518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01228 04 18360615 18366120 Gma06g02747 06 51241944 51247082 GST
Gma04g01228 04 18360615 18366120 Gma13g01677 13 31683285 31694187 PCT
Gma13g01677 13 31683285 31694187 Gma04g01228 04 18360615 18366120 PCT