Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01142 GTGAAGGATTTTAATATTGCTGAAACAGAGGAAGACATAAGTACCTATGCTGGATATGTGGGATCATCAATGATGCTTGGCAGGTCTTTGACATCCATATTGTGGGGTATGATTTCTGATCGCTATGGTAGAAAACCTGTTATCATTATAGGGATTATCACTGTTGTCATTTTCAACACATTATTTGGTCTTAGCACGAATCTTTGGATGGCTGTTAGCATGCGATTTCTTCTTGGATGTTTAAATGGTTTACTTGGACCAATAAAGGCTTATGCTACTGAAATTTTCAGAGAAGAGGAGCAGGCTCTTGGACTCTCAACAGTGGTTGCTGCTTGGGGAGTAGGTTTAGTCATTGGTCCAGCATTGGGAGGTTATTTGGCTCAGCCGGTGTTGAAATACCCACATATATTTCCAAAGGGTTCCTTTTGGGATAGGTTTCCATATTTCTTGCCGTGCTTCATAATATCAGCTTTTGCGTTTGCATCAGCAATTGCTTGCATTTGGCTTCCAGAGACTCTTCACAACCACAAAGATAGCATTGAGTCCACTAAAAATGTTGAAGCTTTGGAAGTTGGAAGCAGTGAGGCAGACAAAGACAGAATGATCCAAAGAGATAAAAGCATCTTCCGAAATTGGCCCTTAATGTCATCTATCATTGTTTACTGTATTTTTTCACTACATGATGTTGCTTACCAGGAGGTTTTCTCATTGTGGGCTTTGAGTCCTTTAAGGTTGGGTGGTCTGAACTTTACAACTGATAATGTTGGTAATGTTCTTGCAATATCAGGTGTTGCTATTCTAATCTTCCAGCTTACACTGTACCGATCAGTTCAAAAAGCTTGTGGACCCATTAATCTAGTTCGCATAACAGGGGTGTTATCCATACCTCTCTTGCAATGTTTTCCCTTCATGACAATGTTGTCAGGCTTCACACTGGACATAGTGATCAATATTGCCTCCATTCTGAAGAATGTTATGATTGAGACAATTGCAACTAGTTTATTCCTTCTGCAAAATAAAGCTGTGAAACAACATCAAAGGGGAACAGCTAATAGTATCGCTATGACGGATTATCTTGGTCACAAAAGCATATAA 1095 0.3963 VKDFNIAETEEDISTYAGYVGSSMMLGRSLTSILWGMISDRYGRKPVIIIGIITVVIFNTLFGLSTNLWMAVSMRFLLGCLNGLLGPIKAYATEIFREEEQALGLSTVVAAWGVGLVIGPALGGYLAQPVLKYPHIFPKGSFWDRFPYFLPCFIISAFAFASAIACIWLPETLHNHKDSIESTKNVEALEVGSSEADKDRMIQRDKSIFRNWPLMSSIIVYCIFSLHDVAYQEVFSLWALSPLRLGGLNFTTDNVGNVLAISGVAILIFQLTLYRSVQKACGPINLVRITGVLSIPLLQCFPFMTMLSGFTLDIVINIASILKNVMIETIATSLFLLQNKAVKQHQRGTANSIAMTDYLGHKSI 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01142 364 Pfam Major Facilitator Superfamily 2 356 IPR011701 GO:0022857|GO:0055085
Gma04g01142 364 SUPERFAMILY MFS general substrate transporter 15 356 IPR036259 -
Gma04g01142 364 PRINTS Tetracycline resistance protein signature 105 127 IPR001958 GO:0022857
Gma04g01142 364 PRINTS Tetracycline resistance protein signature 48 72 IPR001958 GO:0022857
Gma04g01142 364 PRINTS Tetracycline resistance protein signature 279 299 IPR001958 GO:0022857
Gma04g01142 364 Gene3D MFS general substrate transporter like domains 4 358 IPR036259 -
Gma04g01142 364 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 1 360 - -
Gma04g01142 364 PANTHER ZINC INDUCED FACILITATOR-LIKE PROTEIN 1 360 - -
Gma04g01142 364 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 364 IPR020846 GO:0022857
Gma04g01142 364 CDD MFS_SLC46_TetA_like 7 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01142 Gma-Chr4 16110047 16127482 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01142 04 16110047 16127482 Gma06g02784 06 51681981 51689027 GST
Gma04g01142 04 16110047 16127482 Gma13g01653 13 31357415 31366158 PCT
Gma04g01142 04 16110047 16127482 Gma15g02152 15 43599034 43607939 PCT
Gma13g01653 13 31357415 31366158 Gma04g01142 04 16110047 16127482 PCT
Gma15g02152 15 43599034 43607939 Gma04g01142 04 16110047 16127482 PCT