Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00416 ATGGTGGACAAGATGAATATGCTGATATTCAAGTCCCTTCAGATTTCTTTGCTGCTAGTTTTCTCTATCAGAAACACCACAGCAGAAAAGAAAACCCATCACACAAAACACACATACATAATTCACATGGACAAGTTCAACATGCCAGAGAGTTTTAACGACCATCTCCTCTGGTTTGATTCATCACTAAAATCAGTATCAGACTCAGCAGAGATGCTCTACACATATAAAAAAGTAGCTCATGGCTTCTCTACAAGGCTAACTACGCAAGAAGCAGAGTTGCTCTCAAAGCAACCTGGTGTTCTCTCCGTCATCCCGGAAGTTAGATATGATCTTCACACAACTCGAACACCAGAGTTTCTGGGGTTGGCCAAATACAGCACTCTTTCACTGGCCTCTGGCAAACAAAGCGATGTGATTGTCGGAGTGCTAGACACTGGTGTGTGGCCTGAACTAAAGAGCTTCGACGACACCGGACTGGGGCCAGTACCTAGTAGCTGGAAAGGTGAGTGTGAGAGAGGTAAGAATTTCAACCCATCAAACTGTAATAAGAAACTTGTTGGTGCAAGGTTTTTCTCGAGGGGCTACGAGGCAGCCTTTGGACCCATCGACGAAAAGACGGAATCAAAGTCACCAAGGGATGATGATGGCCACGGAAGTCACACCTCAACAACGGCAGCAGGTTCTGCAGTTGTAGGAGCAAGCCTCTTTGGTTTTGCTAATGGGACAGCAAGAGGCATGGCCACACAAGCCAGACTTGCAACTTACAAAGTGTGTTGGCTTGGAGGGTGCTTTACATCAGACATAGCTGCTGGAATTGACAAGGCCATTGAAGATGGTGTCAACATCCTTTCCATGTCAATTGGGGGAGGTTTGATGGATTACTACAAAGACACTATTGCAATTGGAACTTTTGCGGCCACTGCCCATGGAATACTGGTTTCCAATTCAGCAGGAAATGGTGGGCCTAGTCAAGCAACTTTGTCTAATGTGGCACCATGGCTAACCACAGTGGGTGCGGGAACTATAGACCGTGATTTCCCTGCCTATATCACCCTTGGAAATGGAAAGATGTACACAGGGGTGTCACTTTACAATGGCAAACTCCCACCCAATTCTCCACTGCCAATTGTTTATGCTGCAAATGTAAGCGATGAATCCCAAAATCTGTGCACCAGAGGTACTTTGATTGCTGAAAAAGTAGCCGGAAAAATCGTGATATGTGACCGAGGAGGGAATGCTAGGGTGGAAAAGGGTTTGGTGGTGAAGAGTGCTGGAGGCATTGGGATGATACTATCAAACAATGAAGACTATGGGGAAGAGTTAGTTGCTGACTCCTATCTCCTCCCTGCAGCAGCTTTGGGCCAGAAATCAAGCAATGAGTTAAAGAAGTATGTTTTCTCATCTCCCAATCCCACAGCTAAGCTTGGATTTGGTGGCACCCAATTAGGGGTTCAACCATCCCCAGTGGTGGCAGCTTTCAGCTCAAGAGGGCCAAATGTGCTCACACCAAAAATACTCAAACCAGACCTGATTGCTCCAGGAGTCAACATCCTAGCTGGGTGGACTGGTGCAGTTGGACCAACTGGCTTGACTGAAGACACCAGACATGTGGAATTCAACATCATTTCAGGCACTTCCATGTCCTGCCCCCATGTCACTGGCTTAGCTGCCCTTCTTAAGGGCACTCACCCAGAATGGAGCCCTGCAGCTATAAGGTCTGCCCTCATGACCACAGCTTACAGAACCTACAAAAATGGCCAAACCATAAAAGATGTCGCCACCGGGCTACCGGCTACGCCATTTGATTATGGGGCCGGACACGTTGATCCAGTGGCTGCGTTTGATCCTGGTCTTGTGTATGATACTTCCGTGGATGACTACTTGAGCTTCTTCTGTGCCTTAAACTACAGTTCCTATCAAATAAAGCTTGTTGCAAGAAGAGACTTCACCTGCAGCAAAAGGAACAATTACAGAGTGGAAGATCTCAATTACCCATCTTTTGCTGTTCCTTTCAACACAGCTTATGGAGTAAAGGGTGGTTCTCGCAAACCAGCCACTGTCCAATATACAAGGACTTTAACAAACGTGGGTGCCCCGGCAACGTATAAAGTTTCGGTGTCGCAGTCTCCCTCGGTGAAGATTATGGTTCAACCACAAACACTTAGTTTCGGGGGACTTAATGAGAAGAAGAACTACACAGTTACGTTCACGTCTTCGTCAAAGCCTTCTGGAACAAACAGCTTTGCTTATCTGGAATGGTCGGATGGGAAACATAAGGTTACTAGTCCCATTGCTTTCAGCTGGACTTAG 2313 0.4669 MVDKMNMLIFKSLQISLLLVFSIRNTTAEKKTHHTKHTYIIHMDKFNMPESFNDHLLWFDSSLKSVSDSAEMLYTYKKVAHGFSTRLTTQEAELLSKQPGVLSVIPEVRYDLHTTRTPEFLGLAKYSTLSLASGKQSDVIVGVLDTGVWPELKSFDDTGLGPVPSSWKGECERGKNFNPSNCNKKLVGARFFSRGYEAAFGPIDEKTESKSPRDDDGHGSHTSTTAAGSAVVGASLFGFANGTARGMATQARLATYKVCWLGGCFTSDIAAGIDKAIEDGVNILSMSIGGGLMDYYKDTIAIGTFAATAHGILVSNSAGNGGPSQATLSNVAPWLTTVGAGTIDRDFPAYITLGNGKMYTGVSLYNGKLPPNSPLPIVYAANVSDESQNLCTRGTLIAEKVAGKIVICDRGGNARVEKGLVVKSAGGIGMILSNNEDYGEELVADSYLLPAAALGQKSSNELKKYVFSSPNPTAKLGFGGTQLGVQPSPVVAAFSSRGPNVLTPKILKPDLIAPGVNILAGWTGAVGPTGLTEDTRHVEFNIISGTSMSCPHVTGLAALLKGTHPEWSPAAIRSALMTTAYRTYKNGQTIKDVATGLPATPFDYGAGHVDPVAAFDPGLVYDTSVDDYLSFFCALNYSSYQIKLVARRDFTCSKRNNYRVEDLNYPSFAVPFNTAYGVKGGSRKPATVQYTRTLTNVGAPATYKVSVSQSPSVKIMVQPQTLSFGGLNEKKNYTVTFTSSSKPSGTNSFAYLEWSDGKHKVTSPIAFSWT 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00416 770 Pfam Subtilase family 137 591 IPR000209 GO:0006508|GO:0008236
Gma04g00416 770 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
Gma04g00416 770 PRINTS Subtilisin serine protease family (S8) signature 214 227 IPR015500 -
Gma04g00416 770 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
Gma04g00416 770 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 768 IPR045051 -
Gma04g00416 770 SUPERFAMILY Subtilisin-like 112 619 IPR036852 GO:0004252|GO:0006508
Gma04g00416 770 MobiDBLite consensus disorder prediction 203 225 - -
Gma04g00416 770 MobiDBLite consensus disorder prediction 203 220 - -
Gma04g00416 770 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Gma04g00416 770 CDD PA_subtilisin_like 350 476 - -
Gma04g00416 770 Gene3D Peptidase S8/S53 domain 138 628 IPR036852 GO:0004252|GO:0006508
Gma04g00416 770 Pfam Fibronectin type-III domain 662 766 IPR041469 -
Gma04g00416 770 Pfam Peptidase inhibitor I9 38 113 IPR010259 -
Gma04g00416 770 Gene3D - 632 769 - -
Gma04g00416 770 CDD Peptidases_S8_3 110 581 IPR034197 -
Gma04g00416 770 ProSiteProfiles Serine proteases, subtilase domain profile. 109 615 - -
Gma04g00416 770 Pfam PA domain 376 462 IPR003137 -
Gma04g00416 770 Gene3D - 344 484 - -
Gma04g00416 770 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 113 IPR037045 -
Gma04g00416 770 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 25 768 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00416 Gma-Chr4 3607395 3610293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00416 38 770 Subtilisin-like Serine Gene Family AT5G67360 65.672 0.0 994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00416 04 3607395 3610293 Gma04g00416 04 3607395 3610293 ECH
Gma04g00416 04 3607395 3610293 Gma06g00405 06 3477772 3480456 GST
Gma17g02270 17 40602294 40604896 Gma04g00416 04 3607395 3610293 PCT
Gma14g00765 14 7859745 7862547 Gma04g00416 04 3607395 3610293 PCT
Gma04g00416 04 3607395 3610293 Gma17g02270 17 40602294 40604896 PCT
Gma04g00416 04 3607395 3610293 Gma14g00765 14 7859745 7862547 PCT