Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00397 ATGGGGGGTTGGGCTATAGCGGTGCATGGTGGCGCAGGTGTGGACCCTAATCTCCCACCGGAGCGTCAAGATCAAGCCAAACAACTCCTCACTCGCGTTCTCAATCTTGGCATCTCTGCCCTTCGTTCCAATGCTTCTGCCCTCGATGTCGTCGAACTTGTCGTACGGGAACTGGAAACAGATCCACTGTTCAACTCTGGTCGCGGAGCTGCTCTGACAGAAAAGGGAACAGCGGAATTAGAAGCAAGCATCATGGATGGTTCCAATAGACGATGCGGCGCCGTTTCGGGCGTCACCACCGTCAAAAACCCCATCTCACTCGCTCGCCTTGTCATGGAAAACTCACCCCACTCCTACCTCGCCTTTAACGGCGCTGAAGATTTCGCCAGACAACAGGGTGTGGAGATTGTGGAGAACGAATACTTCATCACCCCTGAAAATGTTGGTATGCTGAAACTCGCAAAGGAAGCAAACGCAATCCTGTTTGATTATAGGGTTCCATTGCACAATGGATACGAAAGTTGCGGTGTGGAGGTTGAGAATCCGTTGCAAATGAATGGACTGCCGATCAGCGTGTACGCGCCGGAGACGGTGGGGTGCGTGGTGGTGGACAGAGAGGGGCGGTGTGCGGCCGCCACGTCGACAGGGGGATTGATGAACAAGAAGTGTGGTAGGATCGGTGACTCACCTCTGATAGGCGCAGGTACTTACGCGTGTAAGGTGTGTGGGGTGTCGTGCACTGGGGAAGGTGAGGCTATAATACGTGGTACGCTGGCGCGAGAGGTGGCGGCGGTGATGGAATACAAAGGACTGGAGCTTCAGGGGGCAGTGGACTTTGTGATGGAGCAGCGCCTTGAGGGAGGGAAGGCAGGGCTGATAGCGGTGTCGAATACTGGTGACGTGGCGTATGGATTCAACTCTAATGCCATGTTCAGGGCATGCGCCACCGAGGATGGATTCATGGAGGTTGGAATCTGGGAATAA 984 0.5467 MGGWAIAVHGGAGVDPNLPPERQDQAKQLLTRVLNLGISALRSNASALDVVELVVRELETDPLFNSGRGAALTEKGTAELEASIMDGSNRRCGAVSGVTTVKNPISLARLVMENSPHSYLAFNGAEDFARQQGVEIVENEYFITPENVGMLKLAKEANAILFDYRVPLHNGYESCGVEVENPLQMNGLPISVYAPETVGCVVVDREGRCAAATSTGGLMNKKCGRIGDSPLIGAGTYACKVCGVSCTGEGEAIIRGTLAREVAAVMEYKGLELQGAVDFVMEQRLEGGKAGLIAVSNTGDVAYGFNSNAMFRACATEDGFMEVGIWE 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00397 327 CDD Asparaginase_2 5 319 - -
Gma04g00397 327 Pfam Asparaginase 4 326 IPR000246 GO:0016787
Gma04g00397 327 Gene3D (Glycosyl)asparaginase 197 327 - -
Gma04g00397 327 PANTHER L-ASPARAGINASE 1 327 IPR000246 GO:0016787
Gma04g00397 327 PANTHER PEPTIDASE T2, ASPARAGINASE 2, NUCLEOPHILE AMINOHYDROLASE-RELATED 1 327 - -
Gma04g00397 327 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 324 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00397 Gma-Chr4 3433917 3435669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00397 6 261 Miscellaneous Gene Families AT4G00590 27.076 6.47e-15 73.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00397 04 3433917 3435669 Gma04g00397 04 3433917 3435669 ECH
Gma04g00397 04 3433917 3435669 Gma06g00386 06 3342434 3344081 GST
Gma17g02285 17 40772743 40774618 Gma04g00397 04 3433917 3435669 PCT
Gma14g00753 14 7735772 7738286 Gma04g00397 04 3433917 3435669 PCT
Gma04g00397 04 3433917 3435669 Gma17g02285 17 40772743 40774618 PCT
Gma04g00397 04 3433917 3435669 Gma14g00753 14 7735772 7738286 PCT