Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00389 ATGGAAGCAGGGGAAGATTGCTGCGTCAAGGTCGCGGTTCATGTACGGCCACTCATCGCCGACGAGAAGCTTCAAGGATGCAAAGACTGCGTCACCGTCGTTTCAGGGAAGCCGCAGGTACAAATTGGTGCTCACTCCTTTACATTTGATCATGTTTATGGAAGCACCGGTTCTCCCTCAAGTTCCATGTTTGAAGAATGTGTAGCTCCCCTTATTGATGGTTTGTTTCAAGGATATAATGCTACTGTTCTCGCATATGGTCAGACAGGTTCTGGGAAAACGTACACCATGGGAACTGGCTTTAAGGATGGTTGTCAAACAGGAATAGTACCCCAAGTTATGAATGTTTTGTTTAGCAAAATTGGGACCCTAAAGCACCAGATTGATTTTCAGTTGCATGTTTCCTTTATTGAGATTCTTAAAGAAGAAGTAAGAGACTTGCTGGATCCCTCCTCCATGAGTAAACCAGAAACTGCAAACGGACATGCAGGAAAAATGACCTCTCCTGGGAAGCCACCAATACAAATTCGTGAGACATCAAATGGTGTCATCACCCTTGCAGGATCTACCGAAGTTAGTGTAGCAACACTAAAAGAAATGGCTGCTTGCTTGGAACAGGGATCATTGAGCAGAGCAACTGGGAGCACAAATATGAACAACCAATCTAGTCGATCTCATGCCATCTTCACGATCACATTAGAGCAAATGCGCAAGCTCAATATTCCTGGTGACAGCTGTTCAAATGATACCATGAATGAAGAGTATCTTTGTGCCAAGTTGCACTTAGTAGATCTTGCTGGATCAGAACGAGCTAAAAGAACGGGGTCAGATGGTCTGCGTTTTAAGGAAGGAGTTCACATTAACAAAGGCCTCCTAGCACTTGGTAATGTTATTAGTGCACTTGGTGATGAAAAGAAGCGAAAGGAAGGTGTTCATGTTCCATATAGGGATAGTAAACTTACTAGGCTTTTGCAGGATTCACTAGGAGGTAACAGCAGAACTTTCATGATAGCCTGCATAAGTCCTGCTGATATTAATGCTGAGGAAACCCTTAACACTTTGAAGTATGCAAACCGTGCACGCAACATAAAAAATAAGCCTGTTATCAATAGAGACCCCATGTCCAATGAGATGCTAAAAATGCGACAACAACTTGAGTATTTGCAGGCAGAACTTTGTGCTCGTGCTGGCGGCTCTTCTGAGGAAGTTCAGGTCCTTAAGGAAAGAATTGCTTGGCTTGAAGCTGCTAATGAAGATCTTTGCCGTGAACTTCATGAATACCGTAGTAGATGCTCTATTGTAGAACAAAGTGAAAGGGAAGCTTATgatggtagcacatacattgtgaagactgatgcagttaagaggagcttacctatcacagaagctgaatatccaataagtgaaaccgtggGTGATTCTAGGGAAATTGAAGAAGTGGCAAAAGAGTGGGAGCACACACTTCTACAGAATAGTATGGATAGAGAGTTACATGAATTGAATAAACGCTTGCAGCAGAAAGAGTCTGAGATGAAGCTTTTTGGAATATCTGATGCTGAAGTACTCAAGCAGCACTTTGGAAGAAAGATAACGGAATTAGAGGATGAGAAGAGAGTAGTTCAGCGAGAGAGAGATTGTCTTTTGGCTGAAGTTGAAAATCTTGCTGCCAATACTGATGGACATACACAGAAATTAGAGGATATCCATGCCCAAAAATTGAAAGCACTTGAAGCACAGATTCTGGATCTGAAGAAGAAGCAAGAGAGTCAGGTCCAACTTCTGAAGCAAAAGCAAAAAAGTGATGAAGCAGCAAAGAGACTGCAAGATGAAATACAGTGTATAAAGGCCCAAAAGGTTCAATTGCAGCAAAGGATAAAACAAGAAGCCGAACAGTTTCGGCAGTGGAAGGCTTCAAGAGAGAAAGAGCTGTTGCAATTAAAGAAGGAGGGAAGAAGAAATGAGTATGAAAGACACAAGCTGCAGGCTTTAAATCAGCGGCAGAAATTGGTTCTTCAGAGAAAAACTGAAGAAGCTGCAATGGCCACCAAGAGGTTAAAGGAGTTGTTAGAAGCACGTAAAACTTCCAGCCGAGAAACTTTAGTTACAATGAATGGAAGTGGAACAAATGGTCAGAGCAATGAGAAATCTTTACAACGGTGGCTTGATCATGAACTAGAAGTCATGGTAAAAGAGCATGAAGTTCGTTTTGAGTATGAGAAACAAAGCCAAGTGCGAGCTGCCCTTGCAGAGGAATTGGCCATGCTGAAGCAAGTAAATGAGTTTGCTGCAAAGGGTCGCGGTCCTCCAAGAAAGAATGGATTTGCCAGGGCATCCTCCATGTCACCAAATGCAAGAATGGCCAGAATAGCTTCACTTGAGAACATGCTGAGCATATCATCTAATTCACTTGTAGCAATGGCTTCTCAACTTTCTGAGGCAGAAGAAAGAGAACGAGCCTTCTCTAATCGTGGACGCTGGAATCAGTTGCGCTCTATGGGAGAAGCCAAGAATTTGCTTCAATATATGTTTAATTCTGTTGCAGATGCTAGGTGCCAACTCTGGGAGAAGGACATGGAGATCAGGGAAATGAAAGATCAAATCAAAGAACTTGTTGGTCTCTTACGGCAAAGCGAGATGAAGAGAAAGGAAGTTGAGAAGGAGCTAAAAGTAAGAGAGCAAGCTGTTGGAACCACATTGGCTACACCACCATCTGGAGACTCCCCAAATCCATCGAAACAATATGCTGAAGACATGAAGGGGCTCTTATCACCAGTGTCTATGCCAGTGCCTAAACAGCTAAAATACACGCCAGGGGTTGCCAATGGTTTGGTGAGAGAATCAGCAGCATTTGTAGATCAGGGTAGAAGGATGGTACCCATCGGACAGTTGTCAATGAAAAAACTAGCAATTGTAGGACAAGCTTCTGGAAAGTTATGGAGGTGGAAAAGAAGTCATCATCAGTGGTTACTACAGTTCAAGTGGAAGTGGCAGAAACCATGGAGACTTTCAGAATGGATACGACACAGTGATGAGACAATCATGAGAACAAAACCACGCTCACAGGCTTTGTCACGTATCAGGTGA 3084 0.4186 MEAGEDCCVKVAVHVRPLIADEKLQGCKDCVTVVSGKPQVQIGAHSFTFDHVYGSTGSPSSSMFEECVAPLIDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGCQTGIVPQVMNVLFSKIGTLKHQIDFQLHVSFIEILKEEVRDLLDPSSMSKPETANGHAGKMTSPGKPPIQIRETSNGVITLAGSTEVSVATLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLNIPGDSCSNDTMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTFMIACISPADINAEETLNTLKYANRARNIKNKPVINRDPMSNEMLKMRQQLEYLQAELCARAGGSSEEVQVLKERIAWLEAANEDLCRELHEYRSRCSIVEQSEREAYDGSTYIVKTDAVKRSLPITEAEYPISETVGDSREIEEVAKEWEHTLLQNSMDRELHELNKRLQQKESEMKLFGISDAEVLKQHFGRKITELEDEKRVVQRERDCLLAEVENLAANTDGHTQKLEDIHAQKLKALEAQILDLKKKQESQVQLLKQKQKSDEAAKRLQDEIQCIKAQKVQLQQRIKQEAEQFRQWKASREKELLQLKKEGRRNEYERHKLQALNQRQKLVLQRKTEEAAMATKRLKELLEARKTSSRETLVTMNGSGTNGQSNEKSLQRWLDHELEVMVKEHEVRFEYEKQSQVRAALAEELAMLKQVNEFAAKGRGPPRKNGFARASSMSPNARMARIASLENMLSISSNSLVAMASQLSEAEERERAFSNRGRWNQLRSMGEAKNLLQYMFNSVADARCQLWEKDMEIREMKDQIKELVGLLRQSEMKRKEVEKELKVREQAVGTTLATPPSGDSPNPSKQYAEDMKGLLSPVSMPVPKQLKYTPGVANGLVRESAAFVDQGRRMVPIGQLSMKKLAIVGQASGKLWRWKRSHHQWLLQFKWKWQKPWRLSEWIRHSDETIMRTKPRSQALSRIR 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00389 1027 Coils Coil 860 894 - -
Gma04g00389 1027 MobiDBLite consensus disorder prediction 897 911 - -
Gma04g00389 1027 Coils Coil 403 423 - -
Gma04g00389 1027 ProSitePatterns Kinesin motor domain signature. 258 269 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gma04g00389 1027 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 2 1026 - -
Gma04g00389 1027 Coils Coil 523 557 - -
Gma04g00389 1027 CDD KISc_KIF4 7 364 - -
Gma04g00389 1027 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 393 IPR027417 -
Gma04g00389 1027 Coils Coil 566 638 - -
Gma04g00389 1027 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-LIKE PROTEIN 2 1026 - -
Gma04g00389 1027 Coils Coil 490 510 - -
Gma04g00389 1027 Coils Coil 671 691 - -
Gma04g00389 1027 MobiDBLite consensus disorder prediction 150 176 - -
Gma04g00389 1027 Gene3D Kinesin motor domain 2 391 IPR036961 -
Gma04g00389 1027 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma04g00389 1027 PRINTS Kinesin heavy chain signature 216 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma04g00389 1027 PRINTS Kinesin heavy chain signature 259 277 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma04g00389 1027 PRINTS Kinesin heavy chain signature 313 334 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma04g00389 1027 SMART kinesin_4 6 371 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma04g00389 1027 ProSiteProfiles Kinesin motor domain profile. 8 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma04g00389 1027 MobiDBLite consensus disorder prediction 893 914 - -
Gma04g00389 1027 Pfam Kinesin motor domain 15 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00389 Gma-Chr4 3354539 3366910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00389 9 387 Calmodulin-binding Proteins AT5G65930 33.159 4.49e-53 201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00389 04 3354539 3366910 Gma04g00389 04 3354539 3366910 ECH
Gma04g00389 04 3354539 3366910 Gma06g00380 06 3269105 3280630 GST
Gma17g02297 17 40915176 40930271 Gma04g00389 04 3354539 3366910 PCT
Gma14g00742 14 7542292 7554036 Gma04g00389 04 3354539 3366910 PCT
Gma04g00389 04 3354539 3366910 Gma17g02297 17 40915176 40930271 PCT
Gma04g00389 04 3354539 3366910 Gma14g00742 14 7542292 7554036 PCT