Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00363 ATGCAAGGTTCTAGTCTTAAAAAGATGCTGAAGACAATGCCATCTAAAGCTTCGATTACCAGAATCAATTTGGTCTTCCTTGTTGTATTTCTGGTTGTTTATGCCACTGTTCTTCCCCATCCATCTTCTGACTATTTGCAGGATGCAGGATCCATAGTGAGGTGCTCTTTGGGCGAATGTCATCACAGGGTAAGACACGAAAACTTCAAAATGAAAGCGGCATTGGATGAACCTCAAGCAAACCCACAGAGGCAAAAGAATAAGAGTGCAAAGAAGATAGAAGTACCAAGCTTTTTTAGCAAGTTAGGGGAAAGAATGAAGATTGGAATGGTAAACATGAAAGAAAACGATGTAAGTAACTGGAGCACGCATGGGGAAAGGACAAGCGTTTATTTTGAGAGGGTATCGCAGTTTTTGAACTGGACGGACTTGTTTCCCGAATGGATAGACGAGGAGGAAGAGAATGATGTGCCATCATGTCCAGAGATACCTATGCCGGAGTATGCAGAATACGGAAGCATGGACGTGATCGTGGCTAAGCTGCCATGCAGGTATCCCGAAGAAGGGTGGAAGAGGGACGTTTTCCGGTTGCAAGTTCATCTTATAGTTGCGAATCTAGCCGTGAAGAAGGGGAAGAAGGATTGGAGAGGGAAGACAAGAGTAGTTTTTTGGAGCAAGTGTAGACCAATGCTGGAGCTGTTTCCATGCGACAACTTGGTTAAGGGTGAAGGTGAATGGTGGTATTATGAACCTGAGGTGAAGAGGTTAGAACACAAGGTTTCATTGCCCATTGGGTCCTGCAAGTTGGCCTTGCCTCTCTGGGAACAAGTTGTCGACGAGGTGTACGAATTATCCAAGATTGAGAAAAGCGTTGAAAGCAGAAGGAGAATAAAAcgcgaagcgtacgcaacagtgctgcattcttcggaagcgtacgtttgcggcgcaataacactagcgcaaagcctgctccaaacaggtaccaaacgcgaccttatcctcctgatagacaagttcatctcggttcgtaaacgcgaggccctatccgaagcgggttggaagatccgaatcatcacccggatccgaaacccgaaggccgagaaaggaagctacaacgaatacaactacagcaagttcaggctatggcagctcacggactacgacaaagtaatcttcatcgactccgacatcatcgtactccgaaacctcgacatcctcttccacttcccgcagataacggccacggggaacgaccaatcgatattcaactcgggaataatggtgatcgaaccttccaagtgcacgttccgtacattgatgcggcaccgggacgacgtcgtttcgtacaacggaggggaccaggggtttctgaacgaggtgttcgtgtggtggcacaggctgccgcggagggtgaactttctgaagaacttctgggcgaacacgacggtggaggcgagggcgaagaacgcgttgttcgcggcggagccggcggaggtctacgcgattcactacctgggatggaagccgtggcactgctacagggactatgactgcaactgggacaccccggagcagagggtgtacgccagtgacgtggcgcatcggaggtggtggaaggttcacgacgcgatggaggaggggttgcagaggttgtgtAGGTTGACGAAACGGCGTCGGAGTGAGTTGAACTGGGAGAGGAGGAAGGCCAGCAAGATGAGGTTACCCGATGGACATTGGAAAATCAATATCACTGATCCCAGACGATTTGCCTCTCTCTTTATGGATTAG 1788 0.2578 MQGSSLKKMLKTMPSKASITRINLVFLVVFLVVYATVLPHPSSDYLQDAGSIVRCSLGECHHRVRHENFKMKAALDEPQANPQRQKNKSAKKIEVPSFFSKLGERMKIGMVNMKENDVSNWSTHGERTSVYFERVSQFLNWTDLFPEWIDEEEENDVPSCPEIPMPEYAEYGSMDVIVAKLPCRYPEEGWKRDVFRLQVHLIVANLAVKKGKKDWRGKTRVVFWSKCRPMLELFPCDNLVKGEGEWWYYEPEVKRLEHKVSLPIGSCKLALPLWEQVVDEVYELSKIEKSVESRRRIKREAYATVLHSSEAYVCGAITLAQSLLQTGTKRDLILLIDKFISVRKREALSEAGWKIRIITRIRNPKAEKGSYNEYNYSKFRLWQLTDYDKVIFIDSDIIVLRNLDILFHFPQITATGNDQSIFNSGIMVIEPSKCTFRTLMRHRDDVVSYNGGDQGFLNEVFVWWHRLPRRVNFLKNFWANTTVEARAKNALFAAEPAEVYAIHYLGWKPWHCYRDYDCNWDTPEQRVYASDVAHRRWWKVHDAMEEGLQRLCRLTKRRRSELNWERRKASKMRLPDGHWKINITDPRRFASLFMD 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00363 595 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 298 546 IPR029044 -
Gma04g00363 595 SUPERFAMILY Nucleotide-diphospho-sugar transferases 300 549 IPR029044 -
Gma04g00363 595 PANTHER GLYCOGENIN SUBFAMILY MEMBER 7 588 - -
Gma04g00363 595 Pfam Glycosyl transferase family 8 305 511 IPR002495 GO:0016757
Gma04g00363 595 CDD GT8_Glycogenin 300 544 - -
Gma04g00363 595 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 2 7 588 IPR030519 GO:0005794|GO:0009834|GO:0015020|GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00363 Gma-Chr4 3103835 3108152 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00363 71 594 Glycosyltransferase AT4G33330 66.226 0.0 732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00363 04 3103835 3108152 Gma04g00363 04 3103835 3108152 ECH
Gma17g02322 17 41236469 41242501 Gma04g00363 04 3103835 3108152 PCT
Gma14g00719 14 7169068 7178734 Gma04g00363 04 3103835 3108152 PCT
Gma04g00363 04 3103835 3108152 Gma17g02322 17 41236469 41242501 PCT
Gma04g00363 04 3103835 3108152 Gma14g00719 14 7169068 7178734 PCT