Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00358 ATGTCTGCTCAGAGTGAACACCAATCGGTTTCTCTTTCGGTGCTGCTGAAGCGAGAGTTGGCGAATGAGAAAAATGAGAAGCCGGAGGTTGTTATTTTGCACGGCCAAGCTAGCGAGAATAAGAAAGGAGAGGATTTCACGCTATTGAAGACGgaatgccaaagggtgctgggagatggggtttctacctattctgtttttgggctattcgatggacacaatggatctgctgccgctatttatgccaaggagaatcttctaaacaatgttttaagtgcaattccttctgatcttaacagagatgagtgggtagcagcgttgcctagggctttggttgcaggctttgtaaaaactgataaggattttcaagagaaagCACAAACATCGGGAACAACTGTAACCTTTATGATTACAGAAGGATGGGTTGTAACAGTTGCATCAGTTGGTGATTCCCGTTGCATACTGGAGCCTTCTGAAGGTGGAATTTATTACTTGTCAGCAGACCATAGACTAGAGAGCAATGAAGAGGAgagggtacgcatcacttctagtggaggtgaggttggtcgtctaaatacaggaggaggcaccgagGTTGGTCCTTTGAGATGTTGGCCTGGTGGCTTGTGTCTCTCACGATCCATTGGTGATATGGATGTTGGTGAATTTATTGTCCCTGTACCACACGTAAAGCAAGTGAAGCTTTCCACTGCTGGAGGCAGGATTATTCTCAGCAGTGATGGTGTCTGGGATGCTCTAAGTGCAGAAATGGCCCTTGATTGCTGTCGTGGCATGTCACCTGAGGCTGCAGCAACCCATATTGTGAAAGAATCTGTGCAAGCAAAGGGACTTAGagatgacacaacctgcattgttattgacatattaccccaggagaagccacctacttctgtgctaacacaaaagaaaccggtaaaaggaATGCTTAAGTCCATTTTTCGCAAAAAGTCCTCTGAATCATCATCTTTTATTGACAAAGAATACCTGGAGTCAGATGTGGTACAGGAACTATACGAGGAAGGGTCTGCTATGCTTTCAGAGAGATTAGAAACAAAATATCCACTTTGCAACATGTTCAAGCCGTTTACCTGCGCAGTGTGTCAGGTAGAGATTAAACCTGGAGAAGGTATTTCCATACACGAGGGTGTGCCTAACCCAGGAAGATTGCGTCCCTCATATGGACCTTTCCTTTGCCCAAGTTGCCAAGAGAAGAAAGAAGCCATGGAAGGGAAGCGAACATCAGATAGACTTAGCAGCGGGAGTGACTAA 1290 0.3233 MSAQSEHQSVSLSVLLKRELANEKNEKPEVVILHGQASENKKGEDFTLLKTECQRVLGDGVSTYSVFGLFDGHNGSAAAIYAKENLLNNVLSAIPSDLNRDEWVAALPRALVAGFVKTDKDFQEKAQTSGTTVTFMITEGWVVTVASVGDSRCILEPSEGGIYYLSADHRLESNEEERVRITSSGGEVGRLNTGGGTEVGPLRCWPGGLCLSRSIGDMDVGEFIVPVPHVKQVKLSTAGGRIILSSDGVWDALSAEMALDCCRGMSPEAAATHIVKESVQAKGLRDDTTCIVIDILPQEKPPTSVLTQKKPVKGMLKSIFRKKSSESSSFIDKEYLESDVVQELYEEGSAMLSERLETKYPLCNMFKPFTCAVCQVEIKPGEGISIHEGVPNPGRLRPSYGPFLCPSCQEKKEAMEGKRTSDRLSSGSD 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00358 429 SMART PP2C_4 19 293 IPR001932 -
Gma04g00358 429 PANTHER ALPHABET, ISOFORM E-RELATED 2 425 - -
Gma04g00358 429 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 2 425 - -
Gma04g00358 429 SUPERFAMILY PP2C-like 40 295 IPR036457 -
Gma04g00358 429 CDD PP2Cc 40 295 IPR001932 -
Gma04g00358 429 ProSiteProfiles PPM-type phosphatase domain profile. 29 295 IPR001932 -
Gma04g00358 429 SMART PP2C_SIG_2 56 295 IPR001932 -
Gma04g00358 429 Pfam Protein phosphatase 2C 59 277 IPR001932 -
Gma04g00358 429 Gene3D - 24 302 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00358 Gma-Chr4 3065004 3069272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00358 1 429 PP2C-type Phosphatase Gene Family AT1G47380 78.372 0.0 700
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00358 04 3065004 3069272 Gma04g00358 04 3065004 3069272 ECH
Gma04g00358 04 3065004 3069272 Gma06g00346 06 3002891 3007128 GST
Gma17g02328 17 41316917 41321091 Gma04g00358 04 3065004 3069272 PCT
Gma14g00715 14 7111589 7115830 Gma04g00358 04 3065004 3069272 PCT
Gma04g00358 04 3065004 3069272 Gma17g02328 17 41316917 41321091 PCT
Gma04g00358 04 3065004 3069272 Gma14g00715 14 7111589 7115830 PCT